RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NAT9Q9BTE0 207 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 NIF3L1Q9GZT8 377 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 RNPEPL1Q9HAU8 725 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 SAR1AQ9NR31 198 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ETAA1Q9NY74 926 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 AFF4Q9UHB7 1163 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 TET3O43151 1660 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 RASA1P20936 1047 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 BGNP21810 368 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 IFI35P80217 286 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 MCL1Q07820 350 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 SPDYCQ5MJ68 293 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 RIT2Q99578 217 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 ECSITQ9BQ95 431 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 IQCA1LA6NCM1 817 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 SAC3D1A6NKF1 404 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 FCHO1O14526 889 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 TNFAIP8O95379 198 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 SGPL1O95470 568 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 DDX5P17844 614 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 FDFT1P37268 417 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 RFC5P40937 340 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 PEX5P50542 639 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 ANO4Q32M45 955 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 TFDP3Q5H9I0 405 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 SEL1L3Q68CR1 1132 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 NAPEPLDQ6IQ20 393 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 C11orf63Q6NUN7 778 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 DENND1BQ6P3S1 775 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 ARAP3Q8WWN8 1544 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 APBB2Q92870 758 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 TATDN2Q93075 761 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 ZNF184Q99676 751 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 C17orf80Q9BSJ5 609 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 PI4K2AQ9BTU6 479 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 EPS8L2Q9H6S3 715 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 MPP6Q9NZW5 540 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 SLCO1B7G3V0H7 640 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 EEF2KO00418 725 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 GRAP2O75791 330 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 KRT33BQ14525 404 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 DEFB107AQ8IZN7 70 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 CENPTQ96BT3 561 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 AGXT2Q9BYV1 514 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 CAB39Q9Y376 341 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 SNX9Q9Y5X1 595 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 UBE2Q2LH0YL09 131 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 NDUFS3O75489 264 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 TFRCP02786 760 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 RALBP11234 206 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 CNTFP26441 200 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 TBL3Q12788 808 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 C16orf72Q14CZ0 275 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 KIZQ2M2Z5 673 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 CD302Q8IX05 232 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 ATPAF2Q8N5M1 289 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 TMEM237Q96Q45 408 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 MMTAG2Q9BU76 263 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 MMADHCQ9H3L0 296 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 ACAD9Q9H845 621 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
CLTCL1-209ENST00000617103 ABCA8O94911 1581 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 EVPLLA8MZ36 301 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 PIK3CDO00329 1044 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 EFCAB14O75071 495 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 STAT5BP51692 787 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CSTF3Q12996 717 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 PTK6Q13882 451 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 TTMPQ5BVD1 217 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 EXD1Q8NHP7 514 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 USP33Q8TEY7 942 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 AGAP11Q8TF27 550 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 PAIP1Q9H074 479 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 INO80Q9ULG1 1556 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 ZNF263O14978 683 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 EXTL3O43909 919 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CHRNB3Q05901 458 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 GJC2Q5T442 439 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 FAXCQ5TGI0 409 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 C16orf86Q6ZW13 317 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 PLEKHM3Q6ZWE6 761 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 BBS7Q8IWZ6 715 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 RIN3Q8TB24 985 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 TMEM143Q96AN5 459 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 SGF29Q96ES7 293 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 SH3GL1Q99961 368 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 JMJD4Q9H9V9 463 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 DDX18Q9NVP1 670 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 COL15A1P39059 1388 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 FLT1P17948 1338 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 TIMM44O43615 452 aa11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 CLASP2O75122 1294 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-209ENST00000617103 WBP4O75554 376 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms