RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 LRCH4O75427 683 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 KRT10P13645 584 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ADCY8P40145 1251 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 PSEN2P49810 448 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 YARSP54577 528 aaKnown RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 PPP2R2AP63151 447 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 TAZQ16635 292 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 C6orf118Q5T5N4 469 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ARFGAP1Q8N6T3 406 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 LRRC52Q8N7C0 313 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 IPO4Q8TEX9 1081 aaKnown RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 FRMD8P1Q9BZ68 369 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 FOXP3Q9BZS1 431 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ROPN1BQ9BZX4 212 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ROPN1Q9HAT0 212 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 METTL5Q9NRN9 209 aaKnown RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 CNTN3Q9P232 1028 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 SLC12A6Q9UHW9 1150 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ANAPC5Q9UJX4 755 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
NR1H3-235ENST00000616973 IGHA2P01877 340 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 ATF7P17544 494 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-235ENST00000616973 LSP1P33241 339 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 CPT1AP50416 773 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 HUNKP57058 714 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 TMEM62Q0P6H9 643 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 RASAL3Q86YV0 1011 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 RELL1Q8IUW5 271 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 BEST2Q8NFU1 509 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 NKD2Q969F2 451 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-235ENST00000616973 ZMAT2Q96NC0 199 aaKnown RBP16.56■□□□□ 0.24
NR1H3-235ENST00000616973 OSMRQ99650 979 aa16.56■□□□□ 0.24
NR1H3-235ENST00000616973 BCCIPQ9P287 314 aaKnown RBP eCLIP16.56■□□□□ 0.24
NR1H3-235ENST00000616973 LRRD1A4D1F6 860 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 CAND2O75155 1236 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 ITGBL1O95965 494 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 HPDP32754 393 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 GUCY1A3Q02108 690 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 TAF1CQ15572 869 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 KAZNQ674X7 775 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 CEP128Q6ZU80 1094 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 EIF2AQ9BY44 585 aaKnown RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 CDC42EP4Q9H3Q1 356 aaKnown RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 LRRC4CQ9HCJ2 640 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 DNPEPQ9ULA0 475 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 SETSIPP0DME0 302 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 CYP3A5P20815 502 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 VCPP55072 806 aaKnown RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 MAGOHP61326 146 aaKnown RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 HIC1Q14526 733 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 TRIP13Q15645 432 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 OASLQ15646 514 aaKnown RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 TTC19Q6DKK2 380 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 C17orf99Q6UX52 265 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 ALLCQ8N6M5 410 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 BCAS4Q8TDM0 211 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 EPN3Q9H201 632 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 CNOT10Q9H9A5 744 aaKnown RBP16.55■□□□□ 0.24
NR1H3-235ENST00000616973 TSPAN16Q9UKR8 245 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 GINS2Q9Y248 185 aa16.55■□□□□ 0.24
NR1H3-235ENST00000616973 NDC80O14777 642 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 RNF8O76064 485 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 AGTP01019 485 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 ITGAVP06756 1048 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 PFKMP08237 780 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 PCK1P35558 622 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 CHKAP35790 457 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 RGS2P41220 211 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 PTGISQ16647 500 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 PKDCCQ504Y2 493 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 TNFAIP8L3Q5GJ75 292 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 IZUMO3Q5VZ72 239 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 MFSD5Q6N075 450 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 HIBCHQ6NVY1 386 aaPredicted RBP16.54■□□□□ 0.24
NR1H3-235ENST00000616973 GSTA5Q7RTV2 222 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 UNC93AQ86WB7 457 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 CCDC25Q86WR0 208 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 TTC13Q8NBP0 860 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 CMASQ8NFW8 434 aaPredicted RBP16.54■□□□□ 0.24
NR1H3-235ENST00000616973 SLC35B2Q8TB61 432 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 UBA3Q8TBC4 463 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 DNAJB3Q8WWF6 145 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 FAM118BQ9BPY3 351 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 KATNAL1Q9BW62 490 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 AP5M1Q9H0R1 490 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 STMN4Q9H169 189 aaPredicted RBP16.54■□□□□ 0.24
NR1H3-235ENST00000616973 CXCL16Q9H2A7 254 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 ASNSD1Q9NWL6 643 aa16.54■□□□□ 0.24
NR1H3-235ENST00000616973 UBQLN1Q9UMX0 589 aaKnown RBP16.54■□□□□ 0.24
NR1H3-235ENST00000616973 KDELR1P24390 212 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 IL1R2P27930 398 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 HOXC8P31273 242 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 ZNF143P52747 638 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-235ENST00000616973 SNX17Q15036 470 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 FOXR1Q6PIV2 292 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 BBS12Q6ZW61 710 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 NME8Q8N427 588 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 EMC1Q8N766 993 aa16.53■□□□□ 0.24
NR1H3-235ENST00000616973 TUBGCP4Q9UGJ1 667 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms