RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 TOR1BO14657 336 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 CCND1P24385 295 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 PCSK6P29122 969 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 ZNF135P52742 658 aaPredicted RBP4.38□□□□□ -1.71
CBWD1-224ENST00000616803 HK3P52790 923 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 POU6F2P78424 691 aaPredicted RBP4.38□□□□□ -1.71
CBWD1-224ENST00000616803 TMF1P82094 1093 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 MXRA7P84157 204 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 ZNF844Q08AG5 666 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 ZNF267Q14586 743 aaPredicted RBP4.38□□□□□ -1.71
CBWD1-224ENST00000616803 PTPROQ16827 1216 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 USP45Q70EL2 814 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 HEATR3Q7Z4Q2 680 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 PPP1R32Q7Z5V6 425 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 RAVER1Q8IY67 606 aaKnown RBP4.38□□□□□ -1.71
CBWD1-224ENST00000616803 CAGE1Q8TC20 777 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 RFKQ969G6 155 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 FBXL20Q96IG2 436 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 DUSP26Q9BV47 211 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 BRD9Q9H8M2 597 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 LRIT1Q9P2V4 623 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 ARPP21Q9UBL0 812 aaPredicted RBP4.38□□□□□ -1.71
CBWD1-224ENST00000616803 FRMD4BQ9Y2L6 1034 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 REREQ9P2R6 1566 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 PIK3C2GO75747 1445 aa4.38□□□□□ -1.71
CBWD1-224ENST00000616803 ERVK-7P63135 1459 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 ASXL1Q8IXJ9 1541 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 DIP2BQ9P265 1576 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 USP32Q8NFA0 1604 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 POLRMTO00411 1230 aaKnown RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 DCLK1O15075 740 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 MPPED1O15442 326 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 JUPP14923 745 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 RECQLP46063 649 aaPredicted RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 NPTX2P47972 431 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 ZNF134P52741 427 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 NKX6-1P78426 367 aaPredicted RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 MRPS21P82921 87 aaKnown RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 EXOSC9Q06265 439 aaKnown RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 KIF22Q14807 665 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 PTPRRQ15256 657 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 KAZNQ674X7 775 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 MICALCLQ6ZW33 695 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 USP37Q86T82 979 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 C3orf20Q8ND61 904 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 PSD4Q8NDX1 1056 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 DPF1Q92782 380 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 SCAMP4Q969E2 229 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 HOOK2Q96ED9 719 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 GPR35Q9HC97 309 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 HOMER2Q9NSB8 354 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 IP6K2Q9UHH9 426 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 NUDCQ9Y266 331 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 LUC7L2Q9Y383 392 aaKnown RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 KAT6AQ92794 2004 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 QRICH2Q9H0J4 1663 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 AOX1Q06278 1338 aa4.37□□□□□ -1.71
CBWD1-224ENST00000616803 ARHGEF28Q8N1W1 1705 aaKnown RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 EIF3AQ14152 1382 aaKnown RBP4.37□□□□□ -1.71
CBWD1-224ENST00000616803 CFAP65Q6ZU64 1925 aaKnown RBP4.36□□□□□ -1.71
CBWD1-224ENST00000616803 NEXMIFQ5QGS0 1516 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 RIMBP3CA6NJZ7 1639 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 RIMBP3BA6NNM3 1639 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 RIMBP3Q9UFD9 1639 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 PREX1Q8TCU6 1659 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 DNAJB5O75953 348 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 NHLRC4P0CG21 123 aaPredicted RBP4.36□□□□□ -1.71
CBWD1-224ENST00000616803 TYRP14679 529 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 GRIA3P42263 894 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 TFF2Q03403 129 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 TCF15Q12870 199 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 FOXF2Q12947 444 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 PLS1Q14651 629 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 SYCE2Q6PIF2 218 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 AMIGO2Q86SJ2 522 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 MIER2Q8N344 545 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 FAM109AQ8N4B1 249 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 DDB2Q92466 427 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 SNX19Q92543 992 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 NT5C1BQ96P26 610 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 POLR3GLQ9BT43 218 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 PANK3Q9H999 370 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 SIDT1Q9NXL6 827 aaKnown RBP4.36□□□□□ -1.71
CBWD1-224ENST00000616803 RPGRIP1LQ68CZ1 1315 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 ADGRF5Q8IZF2 1346 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 SETD1BQ9UPS6 1966 aaKnown RBP4.36□□□□□ -1.71
CBWD1-224ENST00000616803 ZFYVE9O95405 1425 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 AGLP35573 1532 aa4.36□□□□□ -1.71
CBWD1-224ENST00000616803 MYO5BQ9ULV0 1848 aa4.35□□□□□ -1.71
CBWD1-224ENST00000616803 FNDC1Q4ZHG4 1894 aaPredicted RBP4.35□□□□□ -1.71
CBWD1-224ENST00000616803 F5H697 171 aa4.35□□□□□ -1.71
CBWD1-224ENST00000616803 PPM1DO15297 605 aa4.35□□□□□ -1.71
CBWD1-224ENST00000616803 FTLP02792 175 aaPredicted RBP4.35□□□□□ -1.71
CBWD1-224ENST00000616803 MYBP10242 640 aa4.35□□□□□ -1.71
CBWD1-224ENST00000616803 SMARCA1P28370 1054 aa4.35□□□□□ -1.71
CBWD1-224ENST00000616803 CYP2C19P33261 490 aa4.35□□□□□ -1.71
CBWD1-224ENST00000616803 PIK3CGP48736 1102 aa4.35□□□□□ -1.71
CBWD1-224ENST00000616803 NHLH1Q02575 133 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms