RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 FAM47DPA6NHR8 397 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 CD302Q8IX05 232 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 PPIL6Q8IXY8 311 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 VTA1Q9NP79 307 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 TXLNGQ9NUQ3 528 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 FGFR1OP2Q9NVK5 253 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
PPP4R3B-206ENST00000616407 TTC4O95801 387 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 ATICP31939 592 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 NXNQ6DKJ4 435 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 SV2CQ496J9 727 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 EIF1ADQ8N9N8 165 aaKnown RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 AGAP3Q96P47 875 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 CDT1Q9H211 546 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 PSMC3IPQ9P2W1 217 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 TSPAN16Q9UKR8 245 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 CACNA1SQ13698 1873 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 RIPK2O43353 540 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 SEPT6Q14141 434 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 FOXR1Q6PIV2 292 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 CNPY3Q9BT09 278 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 ABHD16BQ9H3Z7 469 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 PAK5Q9P286 719 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 SLC12A6Q9UHW9 1150 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 BARX2Q9UMQ3 279 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 SLC8A1P32418 973 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 CPT1AP50416 773 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 RPL7AP62424 266 aaKnown RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 SPATA21Q7Z572 469 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 CCDC33Q8N5R6 958 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■□□□□ 8.3
PPP4R3B-206ENST00000616407 ERVK-5Q9HDB9 667 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 DNPEPQ9ULA0 475 aa13.81□□□□□ -0.2
PPP4R3B-206ENST00000616407 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 CRCPO75575 148 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 NFICP08651 508 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 AKAP5P24588 427 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 SESN3P58005 492 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 NOMO3P69849 1222 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 DENND1BQ6P3S1 775 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 PLPPR4Q7Z2D5 763 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 LRRC34Q8IZ02 419 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 FAM172AQ8WUF8 416 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 LRRC37BQ96QE4 947 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 GLI3P10071 1580 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 VGLL3A8MV65 326 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 STIP1P31948 543 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 IFI35P80217 286 aaPredicted RBP13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 DEUP1Q05D60 604 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 ATG16L1Q676U5 607 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 DNAJB3Q8WWF6 145 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 NTPCRQ9BSD7 190 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 VPS11Q9H270 941 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 CFAP69A5D8W1 941 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 DDX3YO15523 660 aaKnown RBP13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 DCTN3O75935 186 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 PSMC4P43686 418 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 COPS2P61201 443 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 C12orf42Q96LP6 360 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 SMYD3Q9H7B4 428 aa13.8□□□□□ -0.2
PPP4R3B-206ENST00000616407 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 CST3P01034 146 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 ACADSBP45954 432 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 CFAP61Q8NHU2 1237 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 HAUS2Q9NVX0 235 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 TNFSF13BQ9Y275 285 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 C17orf102A2RUQ5 167 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 SOWAHBA6NEL2 793 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 MICAL2O94851 1124 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 RFC1P35251 1148 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 VCPP55072 806 aaKnown RBP13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 THOC5Q13769 683 aaKnown RBP13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 EFHC1Q5JVL4 640 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 DUPD1Q68J44 220 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 RASGEF1CQ8N431 466 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 MREGQ8N565 214 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 C3orf20Q8ND61 904 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 PGBD4Q96DM1 585 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 TEPSINQ96N21 525 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 GPR20Q99678 358 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 ITGA11Q9UKX5 1188 aa13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 MAFBQ9Y5Q3 323 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3B-206ENST00000616407 ZMYM2Q9UBW7 1377 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms