RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	PCDHGC5	Q9Y5F6	944 aa		24.43	■■□□□ 1.5
ACACA-238	ENST00000616352	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	TEX28	O15482	410 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	MME	P08473	750 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	CNP	P09543	421 aa	Known RBP	24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	FMO1	Q01740	532 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	ROR1	Q01973	937 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	MAPK8IP2	Q13387	824 aa	Predicted RBP	24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	BMS1	Q14692	1282 aa	Known RBP	24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	STIL	Q15468	1287 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	TDRD12	Q587J7	1177 aa	Known RBP	24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	TAF3	Q5VWG9	929 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	PDE12	Q6L8Q7	609 aa	Known RBP	24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	LCLAT1	Q6UWP7	414 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	LRRC8A	Q8IWT6	810 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	SLC2A14	Q8TDB8	520 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	AGPAT1	Q99943	283 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	TSPAN16	Q9UKR8	245 aa		24.42	■■□□□ 1.5
ACACA-238	ENST00000616352	ZNF638	Q14966	1978 aa	Known RBP	24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	TMEM265	A0A087WTH1	108 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	SSU72P8	A0A1W2PR75	194 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	WDR27	A2RRH5	827 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	HIDE1	A8MVS5	230 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	MED7	O43513	233 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	LPXN	O60711	386 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	CFH	P08603	1231 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	CPB1	P15086	417 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	NDUFV1	P49821	464 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	NFE2	Q16621	373 aa	Predicted RBP	24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	BAG1	Q99933	345 aa	Predicted RBP	24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	SZT2	Q5T011	3432 aa		24.41	■■□□□ 1.5
ACACA-238	ENST00000616352	ABLIM3	O94929	683 aa		24.4	■■□□□ 1.5
ACACA-238	ENST00000616352	VNN2	O95498	520 aa		24.4	■■□□□ 1.5
ACACA-238	ENST00000616352	SMARCB1	Q12824	385 aa		24.4	■■□□□ 1.5
ACACA-238	ENST00000616352	RAB33A	Q14088	237 aa		24.4	■■□□□ 1.5
ACACA-238	ENST00000616352	ASTE1	Q2TB18	679 aa	Predicted RBP	24.4	■■□□□ 1.5
ACACA-238	ENST00000616352	CLDN5	O00501	218 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	SOX1	O00570	391 aa	Predicted RBP	24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	MICAL2	O94851	1124 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	CSPG5	O95196	566 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	SSTR3	P32745	418 aa	Predicted RBP	24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	CDR1	P51861	262 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	ARPP19	P56211	112 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	CYP27A1	Q02318	531 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	CFAP221	Q4G0U5	840 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	PKDCC	Q504Y2	493 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	CYP26C1	Q6V0L0	522 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	RNF19B	Q6ZMZ0	732 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	C4orf50	Q6ZRC1	276 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	FAM35A	Q86V20	835 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	GLYCTK	Q8IVS8	523 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	FUBP3	Q96I24	572 aa	Known RBP eCLIP	24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	KLHL5	Q96PQ7	755 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	ZNF518B	Q9C0D4	1074 aa		24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	24.39	■■□□□ 1.5
ACACA-238	ENST00000616352	MTMR11	A4FU01	709 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	PTMA	P06454	111 aa	Known RBP	24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	ADORA2B	P29275	332 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	EIF4A3	P38919	411 aa	Known RBP	24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	GOLGA7B	Q2TAP0	167 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	TTC30A	Q86WT1	665 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	PALB2	Q86YC2	1186 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	TMTC1	Q8IUR5	882 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	ANKRD52	Q8NB46	1076 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	SLC30A5	Q8TAD4	765 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	ZNF461	Q8TAF7	563 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	MICAL1	Q8TDZ2	1067 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	PGLYRP2	Q96PD5	576 aa		24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	TTYH1	Q9H313	450 aa	Predicted RBP	24.39	■■□□□ 1.49
ACACA-238	ENST00000616352	RFXAP	O00287	272 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	DDX3X	O00571	662 aa	Known RBP eCLIP	24.38	■■□□□ 1.49	5e-7	■□□□□ 9
ACACA-238	ENST00000616352	ANXA13	P27216	316 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	CA8	P35219	290 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	TPGS2	Q68CL5	300 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	CCDC112	Q8NEF3	446 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	C2orf15	Q8WU43	125 aa	Known RBP	24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	PCDHB18P	Q96TA0	734 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	EMILIN2	Q9BXX0	1053 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	LHX5	Q9H2C1	402 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	ABCB6	Q9NP58	842 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	TMEM30A	Q9NV96	361 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	AFF4	Q9UHB7	1163 aa	Known RBP	24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	PRRC2B	Q5JSZ5	2229 aa	Known RBP	24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	REV3L	O60673	3130 aa		24.38	■■□□□ 1.49
ACACA-238	ENST00000616352	CCZ1B	P86790	482 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	CCZ1	P86791	482 aa	Predicted RBP	24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	DENND1B	Q6P3S1	775 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	SPATA2L	Q8IUW3	424 aa	Predicted RBP	24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	ATAD1	Q8NBU5	361 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	SPPL2B	Q8TCT7	592 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	SMARCD1	Q96GM5	515 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	MED10	Q9BTT4	135 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	RHOBTB2	Q9BYZ6	727 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	KRT82	Q9NSB4	513 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	ABI2	Q9NYB9	513 aa	Predicted RBP	24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	ADAMTS1	Q9UHI8	967 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	PCDHB5	Q9Y5E4	795 aa		24.37	■■□□□ 1.49
ACACA-238	ENST00000616352	SOWAHD	A6NJG2	315 aa		24.36	■■□□□ 1.49
ACACA-238	ENST00000616352		M0QYV0	167 aa		24.36	■■□□□ 1.49
ACACA-238	ENST00000616352	CYP1A1	P04798	512 aa	Predicted RBP	24.36	■■□□□ 1.49

Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms