RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 DIP2BQ9P265 1576 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 TNNI1P19237 187 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 PSMC2P35998 433 aaKnown RBP9.63□□□□□ -0.87
COL12A1-211ENST00000615798 GDI2P50395 445 aaKnown RBP9.63□□□□□ -0.87
COL12A1-211ENST00000615798 AGBL2Q5U5Z8 902 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 IRGCQ6NXR0 463 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 PRR23CQ6ZRP0 262 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 MYL10Q9BUA6 226 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 FOXP3Q9BZS1 431 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 MAD2L2Q9UI95 211 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 PCDHA13Q9Y5I0 950 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 STX11O75558 287 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 BBOX1O75936 387 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 IGKV5-2P06315 115 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 TOP3AQ13472 1001 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-211ENST00000615798 ABCB5Q2M3G0 1257 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 ZNF699Q32M78 642 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 HECTD3Q5T447 861 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 TAB3Q8N5C8 712 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-211ENST00000615798 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
COL12A1-211ENST00000615798 CBY1Q9Y3M2 126 aa9.63□□□□□ -0.87
COL12A1-211ENST00000615798 GJA1P17302 382 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 CSNK2BP67870 215 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 ZNF394Q53GI3 561 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 TTC27Q6P3X3 843 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 UNC13DQ70J99 1090 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 C2CD2Q9Y426 696 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PFASO15067 1338 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 UBAP1LF5GYI3 381 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 O00370 1275 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 MYCBPAPQ8TBZ2 947 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 GAL3ST3Q96A11 431 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 GSDMCQ9BYG8 508 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 RGL2O15211 777 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PTPN5P54829 565 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 STX4Q12846 297 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 C4orf46Q504U0 113 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 INTS2Q9H0H0 1204 aaKnown RBP9.62□□□□□ -0.87
COL12A1-211ENST00000615798 ZCWPW1Q9H0M4 648 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 LIN7AO14910 233 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-211ENST00000615798 ATP9AO75110 1047 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PROSER3Q2NL68 480 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 GIPC3Q8TF64 312 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 SLC9A6Q92581 669 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 RORBQ92753 470 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 NDST4Q9H3R1 872 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 MLXIPLQ9NP71 852 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 CASS4Q9NQ75 786 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 ZNF233A6NK53 670 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 BRAFP15056 766 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 RASA1P20936 1047 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PAGE5Q96GU1 130 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 CHCHD6Q9BRQ6 235 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 GREM2Q9H772 168 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 MYH13Q9UKX3 1938 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 SRRM3A6NNA2 597 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PRG2P13727 222 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 TMEM138Q9NPI0 162 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 KCND1Q9NSA2 647 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 RRN3Q9NYV6 651 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 COMMD3-BMI1R4GMX3 469 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 RRM2P31350 389 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 MFSD14BQ5SR56 506 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 CYP4Z2PQ8N1L4 340 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 KANSL2Q9H9L4 492 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 TBC1D7Q9P0N9 293 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 POLIQ9UNA4 740 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 SAGE2PA6NJ88 616 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 VAV1P15498 845 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 STXBP2Q15833 593 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 SSX2Q16385 188 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PFKFB3Q16875 520 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-211ENST00000615798 C12orf66Q96MD2 445 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 SLC9A7Q96T83 725 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 PIH1D3Q9NQM4 214 aaKnown RBP9.62□□□□□ -0.87
COL12A1-211ENST00000615798 DCCP43146 1447 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 KANSL1LA0AUZ9 987 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 CCDC154A6NI56 674 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 KCNQ3O43525 872 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 NSUN2Q08J23 767 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL12A1-211ENST00000615798 DHX40Q8IX18 779 aaKnown RBP9.62□□□□□ -0.87
COL12A1-211ENST00000615798 KIF2BQ8N4N8 673 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 ERP27Q96DN0 273 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 TRABDQ9H4I3 376 aa9.62□□□□□ -0.87
COL12A1-211ENST00000615798 ZBTB5O15062 677 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 ATP6V1G1O75348 118 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 GGPS1O95749 300 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 NTRK1P04629 796 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 ARPP19P56211 112 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 MYL7Q01449 175 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 KRT33BQ14525 404 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 TRMT5Q32P41 509 aaKnown RBP9.61□□□□□ -0.87
COL12A1-211ENST00000615798 SCUBE1Q8IWY4 988 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 GUF1Q8N442 669 aaKnown RBP9.61□□□□□ -0.87
COL12A1-211ENST00000615798 MYRFQ9Y2G1 1151 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 SCTRP47872 440 aa9.61□□□□□ -0.87
COL12A1-211ENST00000615798 PSMD5Q16401 504 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms