RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ACSF2Q96CM8 615 aaPredicted RBP20.19■□□□□ 0.82
MMP28-204ENST00000615136 HEXIM2Q96MH2 286 aaKnown RBP20.19■□□□□ 0.82
MMP28-204ENST00000615136 FAM118BQ9BPY3 351 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
MMP28-204ENST00000615136 PLEKHA5Q9HAU0 1116 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 BCCIPQ9P287 314 aaKnown RBP eCLIP20.19■□□□□ 0.82
MMP28-204ENST00000615136 IP6K2Q9UHH9 426 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 BARX2Q9UMQ3 279 aaPredicted RBP20.19■□□□□ 0.82
MMP28-204ENST00000615136 CEP83Q9Y592 693 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 FAM169AQ9Y6X4 670 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 PI4K2BG5E9Z4 385 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 MED7O43513 233 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 PSTPIP1O43586 416 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 HCRTO43612 131 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 DUSP11O75319 330 aaKnown RBP20.18■□□□□ 0.82
MMP28-204ENST00000615136 STAU1O95793 577 aaKnown RBP20.18■□□□□ 0.82
MMP28-204ENST00000615136 RFC1P35251 1148 aaPredicted RBP20.18■□□□□ 0.82
MMP28-204ENST00000615136 MAGOHP61326 146 aaKnown RBP20.18■□□□□ 0.82
MMP28-204ENST00000615136 ADCY2Q08462 1091 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 GNASQ5JWF2 1037 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 DCUN1D2Q6PH85 259 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 NLRP14Q86W24 1093 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 SPATS2Q86XZ4 545 aaKnown RBP20.18■□□□□ 0.82
MMP28-204ENST00000615136 CCDC50Q8IVM0 306 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 ARRDC4Q8NCT1 418 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 MAIP1Q8WWC4 291 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 WNT8BQ93098 351 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 LPIN3Q9BQK8 851 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 SNX9Q9Y5X1 595 aa20.18■□□□□ 0.82
MMP28-204ENST00000615136 PDCD11Q14690 1871 aaKnown RBP20.17■□□□□ 0.82
MMP28-204ENST00000615136 DCDC2CA8MYV0 355 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 M0QYV0 167 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 FAM107AO95990 144 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 SHBGP04278 402 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 P4HA1P13674 534 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 MAN1A1P33908 653 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 GPD2P43304 727 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 FLT3LGP49771 235 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 YARSP54577 528 aaKnown RBP20.17■□□□□ 0.82
MMP28-204ENST00000615136 SLMAPQ14BN4 828 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 CYP4F22Q6NT55 531 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 KATNAL2Q8IYT4 538 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 ZNF473Q8WTR7 871 aaKnown RBP20.17■□□□□ 0.82
MMP28-204ENST00000615136 PGM2Q96G03 612 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 KATNAL1Q9BW62 490 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 CNTN3Q9P232 1028 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.17■□□□□ 0.82
MMP28-204ENST00000615136 PIK3R2O00459 728 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 KLF1Q13351 362 aaPredicted RBP20.17■□□□□ 0.82
MMP28-204ENST00000615136 SGO2Q562F6 1265 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 XYLT1Q86Y38 959 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 ARFGAP1Q8N6T3 406 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 EMC1Q8N766 993 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 GOLGA2P5Q9HBQ8 144 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 DERAQ9Y315 318 aa20.17■□□□□ 0.82
MMP28-204ENST00000615136 CAND2O75155 1236 aa20.16■□□□□ 0.82
MMP28-204ENST00000615136 VDRP11473 427 aa20.16■□□□□ 0.82
MMP28-204ENST00000615136 CRYBB1P53674 252 aaPredicted RBP20.16■□□□□ 0.82
MMP28-204ENST00000615136 SEC24CP53992 1094 aa20.16■□□□□ 0.82
MMP28-204ENST00000615136 PSMC1P62191 440 aaKnown RBP20.16■□□□□ 0.82
MMP28-204ENST00000615136 SOX4Q06945 474 aaPredicted RBP20.16■□□□□ 0.82
MMP28-204ENST00000615136 BYSLQ13895 437 aaKnown RBP20.16■□□□□ 0.82
MMP28-204ENST00000615136 ODF2Q5BJF6 829 aa20.16■□□□□ 0.82
MMP28-204ENST00000615136 PAXIP1Q6ZW49 1069 aaPredicted RBP20.16■□□□□ 0.82
MMP28-204ENST00000615136 SMG8Q8ND04 991 aaKnown RBP20.16■□□□□ 0.82
MMP28-204ENST00000615136 CCT8L2Q96SF2 557 aa20.16■□□□□ 0.82
MMP28-204ENST00000615136 TMEM109Q9BVC6 243 aa20.16■□□□□ 0.82
MMP28-204ENST00000615136 CNOT10Q9H9A5 744 aaKnown RBP20.16■□□□□ 0.82
MMP28-204ENST00000615136 SMIM28A0A1B0GU29 152 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 ANKRD65E5RJM6 399 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 RARGP13631 454 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 GJA9P57773 515 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 PRKCZQ05513 592 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 CNGA2Q16280 664 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 NBPF20Q3BBV1 942 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 C9orf57Q5W0N0 161 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 CROCCP2Q86T23 111 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 FAM228AQ86W67 206 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 SEMA4AQ9H3S1 761 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 METTL5Q9NRN9 209 aaKnown RBP20.15■□□□□ 0.82
MMP28-204ENST00000615136 WHRNQ9P202 907 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 SCN10AQ9Y5Y9 1956 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 SPTLC1O15269 473 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 TRAPPC3O43617 180 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 PFKMP08237 780 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 KRT10P13645 584 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 AXLP30530 894 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 KRT17Q04695 432 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 MYO1EQ12965 1108 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 SLC29A2Q14542 456 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 PCBP1Q15365 356 aaKnown RBP eCLIP20.15■□□□□ 0.82
MMP28-204ENST00000615136 GDF6Q6KF10 455 aaPredicted RBP20.15■□□□□ 0.82
MMP28-204ENST00000615136 SYDE1Q6ZW31 735 aaPredicted RBP20.15■□□□□ 0.82
MMP28-204ENST00000615136 PIWIL1Q96J94 861 aaKnown RBP20.15■□□□□ 0.82
MMP28-204ENST00000615136 OSBPL7Q9BZF2 842 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 TSPAN16Q9UKR8 245 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 IPPQ9Y573 584 aa20.15■□□□□ 0.82
MMP28-204ENST00000615136 E7EVH7 732 aa20.14■□□□□ 0.81
MMP28-204ENST00000615136 TP73O15350 636 aa20.14■□□□□ 0.81
MMP28-204ENST00000615136 KRT3P12035 628 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms