RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PCED1BQ96HM7 432 aa14.11□□□□□ -0.15
MDC1-209ENST00000613547 TMEM176AQ96HP8 235 aa14.11□□□□□ -0.15
MDC1-209ENST00000613547 ZNF512Q96ME7 567 aaPredicted RBP14.11□□□□□ -0.15
MDC1-209ENST00000613547 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
MDC1-209ENST00000613547 MED10Q9BTT4 135 aa14.11□□□□□ -0.15
MDC1-209ENST00000613547 ASB3Q9Y575 518 aa14.11□□□□□ -0.15
MDC1-209ENST00000613547 PCDHB4Q9Y5E5 795 aa14.11□□□□□ -0.15
MDC1-209ENST00000613547 PAPLNO95428 1278 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 VNN2O95498 520 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 ANXA13P27216 316 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 CDR1P51861 262 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 ORC1Q13415 861 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 CBX2Q14781 532 aaPredicted RBP14.1□□□□□ -0.15
MDC1-209ENST00000613547 TMEM270Q6UE05 265 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.1□□□□□ -0.15
MDC1-209ENST00000613547 SCN4BQ8IWT1 228 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 LEMD2Q8NC56 503 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.1□□□□□ -0.15
MDC1-209ENST00000613547 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
MDC1-209ENST00000613547 ASB2Q96Q27 587 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 LSM14BQ9BX40 385 aaKnown RBP14.1□□□□□ -0.15
MDC1-209ENST00000613547 CRISPLD1Q9H336 500 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 FAM49BQ9NUQ9 324 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 DAAM1Q9Y4D1 1078 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 NME7Q9Y5B8 376 aa14.1□□□□□ -0.15
MDC1-209ENST00000613547 GRXCR2A6NFK2 248 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 TRIM66O15016 1216 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 SLC34A2O95436 690 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 KRT5P13647 590 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 CD19P15391 556 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 PTPN2P17706 415 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 BDNFP23560 247 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 CYP2F1P24903 491 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 GRIK1P39086 918 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 RAD23BP54727 409 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 SMAD2Q15796 467 aaKnown RBP14.09□□□□□ -0.15
MDC1-209ENST00000613547 CCDC142Q17RM4 750 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 CYP4A22Q5TCH4 519 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 FAM35AQ86V20 835 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 RBBP8NLQ8NC74 664 aaPredicted RBP14.09□□□□□ -0.15
MDC1-209ENST00000613547 WHAMMQ8TF30 809 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 SUSD6Q92537 303 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 KAT5Q92993 513 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 SMARCD1Q96GM5 515 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 CEP295NLQ96MC4 621 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 TWNKQ96RR1 684 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 PLCB1Q9NQ66 1216 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 DNAJC12Q9UKB3 198 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 KIAA1257Q9ULG3 409 aa14.09□□□□□ -0.15
MDC1-209ENST00000613547 SOAT2O75908 522 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 TPM3P06753 285 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 PAEPP09466 180 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 CCDC130P13994 396 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 ATF6P18850 670 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 ACO1P21399 889 aaKnown RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 KCNQ1P51787 676 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 SLC8A3P57103 927 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 KCNMA1Q12791 1236 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 RAPGEF1Q13905 1077 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 SYCP1Q15431 976 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 ARHGAP44Q17R89 818 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 PABPC1LQ4VXU2 614 aaKnown RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 SGO2Q562F6 1265 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 PDZD4Q76G19 769 aaPredicted RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 APTXQ7Z2E3 356 aaKnown RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 GRASPQ7Z6J2 395 aaPredicted RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 UBR7Q8N806 425 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 C12orf29Q8N999 325 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 SLC4A11Q8NBS3 891 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 RNF214Q8ND24 703 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 NEK11Q8NG66 645 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 C8orf48Q96LL4 319 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 KREMEN1Q96MU8 473 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 ERGIC2Q96RQ1 377 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 HNRNPABQ99729 332 aaKnown RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 LPIN3Q9BQK8 851 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 CORO1BQ9BR76 489 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 B3GNT5Q9BYG0 378 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 ZNF518BQ9C0D4 1074 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 WDR6Q9NNW5 1121 aaKnown RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 DMAP1Q9NPF5 467 aaPredicted RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 ASAH2Q9NR71 780 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 KRT82Q9NSB4 513 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 FAM207AQ9NSI2 230 aaPredicted RBP14.08□□□□□ -0.16
MDC1-209ENST00000613547 EHD2Q9NZN4 543 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 CLUHO75153 1309 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 BRWD1Q9NSI6 2320 aa14.08□□□□□ -0.16
MDC1-209ENST00000613547 A0A1B0GTH6 734 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 CLDN5O00501 218 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 ZNF197O14709 1029 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 AP1G2O75843 785 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 FGF19O95750 216 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 FAM200BP0CF97 657 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 CSH1P0DML2 217 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 CSH2P0DML3 217 aa14.07□□□□□ -0.16
MDC1-209ENST00000613547 VDRP11473 427 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms