RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 PTPRDP23468 1912 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 MYBPHLA2RUH7 354 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 IPO7O95373 1038 aaKnown RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 RB1P06400 928 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 RPL17P18621 184 aaKnown RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 FECHP22830 423 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 KIF11P52732 1056 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 ERVK-21P61565 698 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 CCZ1BP86790 482 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 CCZ1P86791 482 aaPredicted RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 FMO1Q01740 532 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 CYP27A1Q02318 531 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 BMS1Q14692 1282 aaKnown RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 MTF1Q14872 753 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 SLC39A12Q504Y0 691 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 PPP1R26Q5T8A7 1209 aaPredicted RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 KIAA0319Q5VV43 1072 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 TMC7Q7Z402 723 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 RNF168Q8IYW5 571 aaPredicted RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 DCP1BQ8IZD4 617 aaKnown RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 SLC2A14Q8TDB8 520 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 ADAMTS19Q8TE59 1207 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 ZNF606Q8WXB4 792 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 ARNTL2Q8WYA1 636 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 MYLPFQ96A32 169 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 CYFIP2Q96F07 1278 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 ZBP1Q9H171 429 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 KCNF1Q9H3M0 494 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
PRKN-210ENST00000612540 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 GTF3C4Q9UKN8 822 aa13.61□□□□□ -0.23
PRKN-210ENST00000612540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 TMCO5BA8MYB1 307 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 O00370 1275 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 CLDN5O00501 218 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 LPXNO60711 386 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 MICAL2O94851 1124 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 EFEMP2O95967 443 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 CHRNB2P17787 502 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 ANXA13P27216 316 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 DSG1Q02413 1049 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 GPM6BQ13491 265 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 MRPL58Q14197 206 aaKnown RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 STILQ15468 1287 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 MAPRE1Q15691 268 aaKnown RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 PLPP4Q5VZY2 271 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 FAM35AQ86V20 835 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 SPATA2LQ8IUW3 424 aaPredicted RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 LNX1Q8TBB1 728 aaPredicted RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 MYCBPAPQ8TBZ2 947 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 POF1BQ8WVV4 589 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 ZSWIM1Q9BR11 485 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 ZCWPW1Q9H0M4 648 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 TLR9Q9NR96 1032 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 ABI2Q9NYB9 513 aaPredicted RBP13.6□□□□□ -0.23
PRKN-210ENST00000612540 MTRRQ9UBK8 725 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 ADAMTS1Q9UHI8 967 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 TSPAN16Q9UKR8 245 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.6□□□□□ -0.23
PRKN-210ENST00000612540 LZTS1Q9Y250 596 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
PRKN-210ENST00000612540 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
PRKN-210ENST00000612540 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 C5orf67F2Z3F1 127 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 DDX3XO00571 662 aaKnown RBP eCLIP13.59□□□□□ -0.23
PRKN-210ENST00000612540 GRM6O15303 877 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 CFHP08603 1231 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 CTSAP10619 480 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 OR1D2P34982 312 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 CREMQ03060 361 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 UBE3AQ05086 875 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 GFPT1Q06210 699 aaPredicted RBP13.59□□□□□ -0.23
PRKN-210ENST00000612540 SKIV2LQ15477 1246 aaKnown RBP13.59□□□□□ -0.23
PRKN-210ENST00000612540 SPA17Q15506 151 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 CNGA2Q16280 664 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 NAA35Q5VZE5 725 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 ARHGAP17Q68EM7 881 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 LCLAT1Q6UWP7 414 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 TRIM72Q6ZMU5 477 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 C4orf50Q6ZRC1 276 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 LRRTM3Q86VH5 581 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 UBA3Q8TBC4 463 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 SPPL3Q8TCT6 385 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 PCED1BQ96HM7 432 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
PRKN-210ENST00000612540 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms