RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ZNF280BQ86YH2 543 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 CPNE8Q86YQ8 564 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 C11orf49Q9H6J7 331 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 TBC1D13Q9NVG8 400 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 DDX43Q9NXZ2 648 aaKnown RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 WDR35Q9P2L0 1181 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 HESX1Q9UBX0 185 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 TMEM191CA6NGB0 347 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 B4GALT3O60512 393 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 PROSCO94903 275 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 SETSIPP0DME0 302 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
CBWD1-220ENST00000612045 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
CBWD1-220ENST00000612045 SLC1A1P43005 524 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 TUBB4BP68371 445 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 TAP1Q03518 808 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 ZNF268Q14587 947 aaPredicted RBP13□□□□□ -0.33
CBWD1-220ENST00000612045 DCUN1D2Q6PH85 259 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 XYLT1Q86Y38 959 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 ANKRD52Q8NB46 1076 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 NOA1Q8NC60 698 aaKnown RBP13□□□□□ -0.33
CBWD1-220ENST00000612045 SLC2A14Q8TDB8 520 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 KRT35Q92764 455 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 MCEEQ96PE7 176 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 SELENOOQ9BVL4 669 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 CARD9Q9H257 536 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 ST7Q9NRC1 585 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 TMEM39AQ9NV64 488 aa13□□□□□ -0.33
CBWD1-220ENST00000612045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 SIGLEC16A6NMB1 481 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 GOLGA8SH3BPF8 625 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 I3L4J1 428 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 M0QZQ0 153 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 TULP2O00295 520 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CEP104O60308 925 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 ATP2C2O75185 946 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 ITGB1P05556 798 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 HSPA1AP0DMV8 641 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 HSPA1BP0DMV9 641 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CTNNA2P26232 953 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 ADORA2BP29275 332 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 BRCC3P46736 316 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 ITIH3Q06033 890 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 DCAF12L1Q5VU92 463 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 PMF1Q6P1K2 205 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 DEFB128Q7Z7B8 93 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 COLGALT2Q8IYK4 626 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CRIPAKQ8N1N5 446 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 SPATA4Q8NEY3 305 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 ACTRT1Q8TDG2 376 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 IPO4Q8TEX9 1081 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 HASPINQ8TF76 798 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 SLC35F5Q8WV83 523 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 ALG3Q92685 438 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 LRFN2Q9ULH4 789 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 TTC3P53804 2025 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CCDC66A2RUB6 948 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 E5RJQ4 531 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 F8W810 466 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CYP11A1P05108 521 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CLTBP09497 229 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 KRT3P12035 628 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 MARCKSL1P49006 195 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 RGS7P49802 495 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 PEX5P50542 639 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 BCAT1P54687 386 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 RNASE9P60153 205 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 PDE4CQ08493 712 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 BST2Q10589 180 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 LRRC26Q2I0M4 334 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 KIAA0319Q5VV43 1072 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 RASGEF1CQ8N431 466 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 SPATA18Q8TC71 538 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 STK32AQ8WU08 396 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 RSPH1Q8WYR4 309 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 MCRS1Q96EZ8 462 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 CASD1Q96PB1 797 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 HNRNPABQ99729 332 aaKnown RBP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.99□□□□□ -0.33
CBWD1-220ENST00000612045 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 MIS12Q9H081 205 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 LCMT1Q9UIC8 334 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 DSEQ9UL01 958 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 PCDHA3Q9Y5H8 950 aa12.99□□□□□ -0.33
CBWD1-220ENST00000612045 TKTP29401 623 aaKnown RBP12.98□□□□□ -0.33
CBWD1-220ENST00000612045 MAN1A1P33908 653 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 C2orf54Q08AI8 447 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 CCDC142Q17RM4 750 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 MDH1BQ5I0G3 518 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 METTL23Q86XA0 190 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms