RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 DSTYKQ6XUX3 929 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 SLFN11Q7Z7L1 901 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 LRRC6Q86X45 466 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 FITM2Q8N6M3 262 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 CKAP2Q8WWK9 683 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 SEPT1Q8WYJ6 367 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 CDKL2Q92772 493 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 ZBTB10Q96DT7 871 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 RNF19AQ9NV58 838 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 ZC3H7BQ9UGR2 993 aaKnown RBP10.85□□□□□ -0.67
CTCFL-216ENST00000608263 TMEM59LQ9UK28 342 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 AGAP1Q9UPQ3 857 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 H0YGN5 161 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 PDHXO00330 501 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 GEMIN4P57678 1058 aaKnown RBP10.85□□□□□ -0.67
CTCFL-216ENST00000608263 ZNF200P98182 395 aaPredicted RBP10.85□□□□□ -0.67
CTCFL-216ENST00000608263 KLC2Q9H0B6 622 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 STXBP5LQ9Y2K9 1186 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 NFS1Q9Y697 457 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 BCL9LQ86UU0 1499 aa10.85□□□□□ -0.67
CTCFL-216ENST00000608263 GON4LQ3T8J9 2241 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 IGLV3-22A0A075B6J6 115 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 NDC80O14777 642 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 NVLO15381 856 aaKnown RBP10.84□□□□□ -0.67
CTCFL-216ENST00000608263 PRKCBP05771 671 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 FDX1P10109 184 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 ANKRD20A2Q5SQ80 823 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 ANKRD20A1Q5TYW2 823 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 SPOCD1Q6ZMY3 1216 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 FAM83AQ86UY5 434 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 NAF1Q96HR8 494 aaKnown RBP10.84□□□□□ -0.67
CTCFL-216ENST00000608263 IDI2Q9BXS1 227 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 KIAA1683Q9H0B3 1180 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.84□□□□□ -0.67
CTCFL-216ENST00000608263 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
CTCFL-216ENST00000608263 IGKV6D-41A0A0C4DH26 115 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 CREB3O43889 395 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 MYL2P10916 166 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 PYGBP11216 843 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 PTGIRP43119 386 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 WDR75Q8IWA0 830 aaKnown RBP10.84□□□□□ -0.67
CTCFL-216ENST00000608263 ABRAQ8N0Z2 381 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 NDUFAF2Q8N183 169 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 MRPL4Q9BYD3 311 aaKnown RBP10.84□□□□□ -0.67
CTCFL-216ENST00000608263 ANKEF1Q9NU02 776 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 ZDHHC18Q9NUE0 388 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 ASNSD1Q9NWL6 643 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 SENP1Q9P0U3 644 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 TAF1P21675 1872 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 CCDC22O60826 627 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 KRT38O76015 456 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 KLC1Q07866 573 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 TFDP2Q14188 446 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 PGM5Q15124 567 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 ATG16L1Q676U5 607 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 DAW1Q8N136 415 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 TLCD1Q96CP7 247 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 SNX25Q9H3E2 840 aa10.84□□□□□ -0.67
CTCFL-216ENST00000608263 C2orf71A6NGG8 1288 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 PIK3CDO00329 1044 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 EDIL3O43854 480 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 RASSF9O75901 435 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 CHRNB2P17787 502 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 ADORA2BP29275 332 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 DRG2P55039 364 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 CHI3L2Q15782 390 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 RABGAP1LQ5R372 815 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 C4orf19Q8IY42 314 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 TMEM161BQ8NDZ6 487 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 CISHQ9NSE2 258 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.83□□□□□ -0.682e-10■■■■□ 19.9
CTCFL-216ENST00000608263 COL20A1Q9P218 1284 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 STRIP2Q9ULQ0 834 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 PRRC2BQ5JSZ5 2229 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 SERPINB3P29508 390 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 ECHS1P30084 290 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 SDC4P31431 198 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 GTF2A2P52657 109 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 EFTUD2Q15029 972 aaKnown RBP eCLIP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 TFDP3Q5H9I0 405 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 C15orf52Q6ZUT6 534 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 MCUQ8NE86 351 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 OR5B17Q8NGF7 314 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 ATXN2LQ8WWM7 1075 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 NMRK2Q9NPI5 230 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 LTBP4Q8N2S1 1624 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 NEMP1O14524 444 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 BNIP3LO60238 219 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 ZWINTO95229 277 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 EGFRP00533 1210 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 PHKA2P46019 1235 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 XRCC4Q13426 336 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 PIGHQ14442 188 aaPredicted RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 RBBP5Q15291 538 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 AMHR2Q16671 573 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 ZCCHC23Q6ZST2 131 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 SCN4BQ8IWT1 228 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms