RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 COPB1P53618 953 aaKnown RBP15.17■□□□□ 0.02
CTSA-219ENST00000607841 MFAP3P55082 362 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 TAF12Q16514 161 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 FILIP1LQ4L180 1135 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 SMYD5Q6GMV2 418 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 PHLDB3Q6NSJ2 640 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 RRAGAQ7L523 313 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 LEMD2Q8NC56 503 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 CEP295NLQ96MC4 621 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 HEXIM2Q96MH2 286 aaKnown RBP15.17■□□□□ 0.02
CTSA-219ENST00000607841 ARID3AQ99856 593 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 PHF7Q9BWX1 381 aaPredicted RBP15.17■□□□□ 0.02
CTSA-219ENST00000607841 HSD3B7Q9H2F3 369 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 TSPY26PQ9H489 355 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 WDR6Q9NNW5 1121 aaKnown RBP15.17■□□□□ 0.02
CTSA-219ENST00000607841 UBE2TQ9NPD8 197 aaPredicted RBP15.17■□□□□ 0.02
CTSA-219ENST00000607841 APEX2Q9UBZ4 518 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 PRKAG3Q9UGI9 489 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 XIRP2A4UGR9 3374 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 TRIM66O15016 1216 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 IL9P15248 144 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 BDNFP23560 247 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 ANXA13P27216 316 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 GRIK1P39086 918 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 CDR1P51861 262 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 ZNF394Q53GI3 561 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 CYP4A22Q5TCH4 519 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 GRASPQ7Z6J2 395 aaPredicted RBP15.16■□□□□ 0.02
CTSA-219ENST00000607841 LUZP1Q86V48 1076 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 ARHGEF19Q8IW93 802 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 TTC9BQ8N6N2 239 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 WHAMMQ8TF30 809 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 TWNKQ96RR1 684 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 B3GNT5Q9BYG0 378 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 HMGXB4Q9UGU5 601 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 KIAA1257Q9ULG3 409 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 PCDHB4Q9Y5E5 795 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 UNC80Q8N2C7 3258 aa15.16■□□□□ 0.02
CTSA-219ENST00000607841 SPTBN5Q9NRC6 3674 aaKnown RBP15.16■□□□□ 0.02
CTSA-219ENST00000607841 TSC2P49815 1807 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 LGALS16A8MUM7 142 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 ZNF197O14709 1029 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 SOAT2O75908 522 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 FGF19O95750 216 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 RFX1P22670 979 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 RAD23BP54727 409 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 ORC1Q13415 861 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 PABPC1LQ4VXU2 614 aaKnown RBP15.15■□□□□ 0.02
CTSA-219ENST00000607841 TMEM270Q6UE05 265 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 PDZD4Q76G19 769 aaPredicted RBP15.15■□□□□ 0.02
CTSA-219ENST00000607841 DNAJB7Q7Z6W7 309 aaPredicted RBP15.15■□□□□ 0.02
CTSA-219ENST00000607841 SCN4BQ8IWT1 228 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 PSMG2Q969U7 264 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 CYFIP2Q96F07 1278 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 SMARCD1Q96GM5 515 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 CORO1BQ9BR76 489 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 POMKQ9H5K3 350 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 AVENQ9NQS1 362 aaPredicted RBP15.15■□□□□ 0.02
CTSA-219ENST00000607841 ASAH2Q9NR71 780 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 EHD2Q9NZN4 543 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 CEP72Q9P209 647 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 DNMT3BQ9UBC3 853 aaKnown RBP15.15■□□□□ 0.02
CTSA-219ENST00000607841 USTQ9Y2C2 406 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 REV3LO60673 3130 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 CLUHO75153 1309 aa15.15■□□□□ 0.02
CTSA-219ENST00000607841 SERPINC1P01008 464 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 RHOP08100 348 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 PAEPP09466 180 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 CSH1P0DML2 217 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 CSH2P0DML3 217 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 ATF6P18850 670 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 ACO1P21399 889 aaKnown RBP15.14■□□□□ 0.01
CTSA-219ENST00000607841 FSHRP23945 695 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 ZNF445P59923 1031 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 UBXN1Q04323 297 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 KCNMA1Q12791 1236 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 DDR2Q16832 855 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 CCDC142Q17RM4 750 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 OTOP3Q7RTS5 596 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 FAM35AQ86V20 835 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 ADHFE1Q8IWW8 467 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 FUKQ8N0W3 1084 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 UBR7Q8N806 425 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 C12orf29Q8N999 325 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 SLC4A11Q8NBS3 891 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 SLC2A14Q8TDB8 520 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 KAT5Q92993 513 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
CTSA-219ENST00000607841 SPATA17Q96L03 361 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 C8orf48Q96LL4 319 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 PCMTD1Q96MG8 357 aaPredicted RBP15.14■□□□□ 0.01
CTSA-219ENST00000607841 KREMEN1Q96MU8 473 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 HNRNPABQ99729 332 aaKnown RBP15.14■□□□□ 0.01
CTSA-219ENST00000607841 LPIN3Q9BQK8 851 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 COL25A1Q9BXS0 654 aaPredicted RBP15.14■□□□□ 0.01
CTSA-219ENST00000607841 ZNF518BQ9C0D4 1074 aa15.14■□□□□ 0.01
CTSA-219ENST00000607841 FAM49BQ9NUQ9 324 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms