RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 FUBP3Q96I24 572 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDCA3-211ENST00000603043 ELOVL4Q9GZR5 314 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 CCL16O15467 120 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 XYLBO75191 536 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 SOAT2O75908 522 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 PAPLNO95428 1278 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 CYP2F1P24903 491 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 TUFMP49411 452 aaKnown RBP16.57■□□□□ 0.24
CDCA3-211ENST00000603043 KCNMA1Q12791 1236 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 GJB7Q6PEY0 223 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 ENOSF1Q7L5Y1 443 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 GPR149Q86SP6 731 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 UBR7Q8N806 425 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
CDCA3-211ENST00000603043 SMG7Q92540 1137 aaKnown RBP16.57■□□□□ 0.24
CDCA3-211ENST00000603043 ZNF707Q96C28 371 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-211ENST00000603043 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-211ENST00000603043 FAM81BQ96LP2 452 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 KREMEN1Q96MU8 473 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 RHOBTB2Q9BYZ6 727 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 CDH22Q9UJ99 828 aa16.57■□□□□ 0.24
CDCA3-211ENST00000603043 USP15Q9Y4E8 981 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-211ENST00000603043 MBTPS2O43462 519 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 HAPLN1P10915 354 aaPredicted RBP16.56■□□□□ 0.24
CDCA3-211ENST00000603043 ALDH1A3P47895 512 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 MFAP3P55082 362 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 UBXN1Q04323 297 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 PLD1Q13393 1074 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 PUS10Q3MIT2 529 aaKnown RBP16.56■□□□□ 0.24
CDCA3-211ENST00000603043 PTCRAQ6ISU1 281 aaPredicted RBP16.56■□□□□ 0.24
CDCA3-211ENST00000603043 TMEM270Q6UE05 265 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 C12orf29Q8N999 325 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 TMEM176AQ96HP8 235 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 PIDD1Q9HB75 910 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 FAM49BQ9NUQ9 324 aa16.56■□□□□ 0.24
CDCA3-211ENST00000603043 GRXCR2A6NFK2 248 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 SERPINC1P01008 464 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 ACO1P21399 889 aaKnown RBP16.55■□□□□ 0.24
CDCA3-211ENST00000603043 BDNFP23560 247 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 KCNQ1P51787 676 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 RAD23BP54727 409 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 MRPS5P82675 430 aaKnown RBP16.55■□□□□ 0.24
CDCA3-211ENST00000603043 FILIP1LQ4L180 1135 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 ATAT1Q5SQI0 421 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 CYP26C1Q6V0L0 522 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 SLC4A11Q8NBS3 891 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 RNF214Q8ND24 703 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 JAKMIP2Q96AA8 810 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 RIPOR3Q96MK2 946 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 LSM14BQ9BX40 385 aaKnown RBP16.55■□□□□ 0.24
CDCA3-211ENST00000603043 B3GNT5Q9BYG0 378 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 PCDHB4Q9Y5E5 795 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 DENND4AQ7Z401 1863 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 POU2F2P09086 479 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 ATF6P18850 670 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 MAGEA11P43364 429 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 EPHB3P54753 998 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 CBX2Q14781 532 aaPredicted RBP16.55■□□□□ 0.24
CDCA3-211ENST00000603043 ELMOD1Q8N336 334 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 SUSD6Q92537 303 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 HEXIM2Q96MH2 286 aaKnown RBP16.55■□□□□ 0.24
CDCA3-211ENST00000603043 MED10Q9BTT4 135 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 ZNF518BQ9C0D4 1074 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 FAM50BQ9Y247 325 aa16.55■□□□□ 0.24
CDCA3-211ENST00000603043 ATP8B3O60423 1300 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 CLDN5O00501 218 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 CCDC130P13994 396 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 MTHFRP42898 656 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 SYCP1Q15431 976 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 KLHDC7AQ5VTJ3 777 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 DPY19L2P1Q6NXN4 242 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 VSTM1Q6UX27 236 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 FAM35AQ86V20 835 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDCA3-211ENST00000603043 FUKQ8N0W3 1084 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 SLC2A14Q8TDB8 520 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 NECTIN4Q96NY8 510 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 PLCB1Q9NQ66 1216 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 CEP72Q9P209 647 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 GREB1Q4ZG55 1949 aa16.54■□□□□ 0.24
CDCA3-211ENST00000603043 TCF20Q9UGU0 1960 aaKnown RBP16.54■□□□□ 0.24
CDCA3-211ENST00000603043 SLC34A2O95436 690 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 RFX1P22670 979 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 KLK7P49862 253 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 VEPH1Q14D04 833 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 SMAD2Q15796 467 aaKnown RBP16.53■□□□□ 0.24
CDCA3-211ENST00000603043 ARHGAP44Q17R89 818 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-211ENST00000603043 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 ZNF512Q96ME7 567 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-211ENST00000603043 PCMTD1Q96MG8 357 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-211ENST00000603043 ASB2Q96Q27 587 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 ERGIC2Q96RQ1 377 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 FAM207AQ9NSI2 230 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-211ENST00000603043 DNAJC12Q9UKB3 198 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 AJAP1Q9UKB5 411 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-211ENST00000603043 SIK3Q9Y2K2 1263 aa16.53■□□□□ 0.24
CDCA3-211ENST00000603043 A0A1B0GTH6 734 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms