RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 WNT6Q9Y6F9 365 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 WDFY3Q8IZQ1 3526 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 HELZP42694 1942 aaKnown RBP18.06■□□□□ 0.48
USE1-208ENST00000600970 CDX4O14627 284 aaPredicted RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 KHNYNO15037 678 aaKnown RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 NOL4O94818 638 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 SEC24BO95487 1268 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 TOP3BO95985 862 aaKnown RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 IFNAR2P48551 515 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 TSPY1Q01534 308 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 NFE2Q16621 373 aaPredicted RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 DDR2Q16832 855 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 EML3Q32P44 896 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 CRELD2Q6UXH1 353 aaPredicted RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 TTC16Q8NEE8 873 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 LEO1Q8WVC0 666 aaPredicted RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 TRMT2BQ96GJ1 504 aaKnown RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 ADAM33Q9BZ11 813 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 TPSD1Q9BZJ3 242 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 TRPC7Q9HCX4 862 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 TMEM9BQ9NQ34 198 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 BLOC1S4Q9NUP1 217 aa18.05■□□□□ 0.48
USE1-208ENST00000600970 AGO2Q9UKV8 859 aaKnown RBP18.05■□□□□ 0.48
USE1-208ENST00000600970 PTPRDP23468 1912 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 ABCA7Q8IZY2 2146 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 SPEGQ15772 3267 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 PATE3B3GLJ2 98 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 USP17L7P0C7H9 530 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 CEACAM1P13688 526 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 CYP2F1P24903 491 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 RPL10AP62906 217 aaKnown RBP18.04■□□□□ 0.48
USE1-208ENST00000600970 COL9A2Q14055 689 aaPredicted RBP18.04■□□□□ 0.48
USE1-208ENST00000600970 ZC2HC1CQ53FD0 456 aaPredicted RBP18.04■□□□□ 0.48
USE1-208ENST00000600970 USP39Q53GS9 565 aaKnown RBP18.04■□□□□ 0.48
USE1-208ENST00000600970 ARL6IP4Q66PJ3 421 aaKnown RBP18.04■□□□□ 0.48
USE1-208ENST00000600970 MCTP1Q6DN14 999 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 SLFN12LQ6IEE8 588 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 C11orf74Q86VG3 221 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 PDCL2Q8N4E4 241 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 TSTD1Q8NFU3 115 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 MYRFLQ96LU7 910 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 ZNF560Q96MR9 790 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 ZHX3Q9H4I2 956 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 STYXL1Q9Y6J8 313 aa18.04■□□□□ 0.48
USE1-208ENST00000600970 TRAV19A0A0A6YYK7 116 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 SLC26A4O43511 780 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 CKMP06732 381 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 HOXB3P14651 431 aaPredicted RBP18.03■□□□□ 0.48
USE1-208ENST00000600970 CSRP1P21291 193 aaKnown RBP18.03■□□□□ 0.48
USE1-208ENST00000600970 BCKDHBP21953 392 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 ABCD1P33897 745 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 POU5F1Q01860 360 aaKnown RBP18.03■□□□□ 0.48
USE1-208ENST00000600970 NR1H3Q13133 447 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 MCM6Q14566 821 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 CYP2U1Q7Z449 544 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 RASSF3Q86WH2 238 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 ARL14EPQ8N8R7 260 aaPredicted RBP18.03■□□□□ 0.48
USE1-208ENST00000600970 USP33Q8TEY7 942 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 CALML4Q96GE6 196 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 ACBD6Q9BR61 282 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 IKZF4Q9H2S9 585 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 ABCB6Q9NP58 842 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 DDX43Q9NXZ2 648 aaKnown RBP18.03■□□□□ 0.48
USE1-208ENST00000600970 GCNT4Q9P109 453 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 L1RE1Q9UN81 338 aa18.03■□□□□ 0.48
USE1-208ENST00000600970 TNRC6BQ9UPQ9 1833 aaKnown RBP18.02■□□□□ 0.48
USE1-208ENST00000600970 ANTXRLA6NF34 631 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 K7EQS6 105 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 EIF5BO60841 1220 aaKnown RBP18.02■□□□□ 0.48
USE1-208ENST00000600970 KRT18P05783 430 aaKnown RBP18.02■□□□□ 0.48
USE1-208ENST00000600970 ACAT1P24752 427 aaKnown RBP18.02■□□□□ 0.48
USE1-208ENST00000600970 PNPLA4P41247 253 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 SEC13P55735 322 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 IRX4P78413 519 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 INTS6LQ5JSJ4 861 aaKnown RBP18.02■□□□□ 0.48
USE1-208ENST00000600970 ANO7Q6IWH7 933 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 CCDC26Q8TAB7 109 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 SH3RF2Q8TEC5 729 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 GATA6Q92908 595 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 AK8Q96MA6 479 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 PKMYT1Q99640 499 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 SCNM1Q9BWG6 230 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 LINC00597Q9H2U6 94 aa18.02■□□□□ 0.48
USE1-208ENST00000600970 C2orf78A6NCI8 922 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 TMEM8BA6NDV4 472 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 IL18RAPO95256 599 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 TCF3P15923 654 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 POLR2BP30876 1174 aaKnown RBP18.01■□□□□ 0.47
USE1-208ENST00000600970 OPRD1P41143 372 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 WNT7BP56706 349 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 CCDC142Q17RM4 750 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 C2orf27AQ580R0 203 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 NT5DC4Q86YG4 428 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 RAD54LQ92698 747 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 CNOT6LQ96LI5 555 aaKnown RBP18.01■□□□□ 0.47
USE1-208ENST00000600970 ST6GALNAC4Q9H4F1 302 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 GTF3C4Q9UKN8 822 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 MMP17Q9ULZ9 603 aa18.01■□□□□ 0.47
USE1-208ENST00000600970 AGAP1Q9UPQ3 857 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms