RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TACC1O75410 805 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 PRAMEF12O95522 483 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 STAU1O95793 577 aaKnown RBP16.92■□□□□ 0.3
VRK3-221ENST00000600284 CST3P01034 146 aaPredicted RBP16.92■□□□□ 0.3
VRK3-221ENST00000600284 CCNE1P24864 410 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 ATICP31939 592 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 AVPR1AP37288 418 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 GPR15P49685 360 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 KPNA1P52294 538 aaPredicted RBP16.92■□□□□ 0.3
VRK3-221ENST00000600284 KRT85P78386 507 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 CSTF1Q05048 431 aaKnown RBP16.92■□□□□ 0.3
VRK3-221ENST00000600284 PPP2R5DQ14738 602 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 VSTM1Q6UX27 236 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 MON1AQ86VX9 555 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 MRPS31Q92665 395 aaKnown RBP16.92■□□□□ 0.3
VRK3-221ENST00000600284 NELL1Q92832 810 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 SPATA32Q96LK8 384 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 MMS19Q96T76 1030 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 SYT15Q9BQS2 421 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 LMAN1LQ9HAT1 526 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 PRMT8Q9NR22 394 aaPredicted RBP16.92■□□□□ 0.3
VRK3-221ENST00000600284 EXOC1Q9NV70 894 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 MAGEC2Q9UBF1 373 aaPredicted RBP16.92■□□□□ 0.3
VRK3-221ENST00000600284 HPSEQ9Y251 543 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 ATP6V1DQ9Y5K8 247 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 COL4A2P08572 1712 aa16.92■□□□□ 0.3
VRK3-221ENST00000600284 RIF1Q5UIP0 2472 aaKnown RBP16.91■□□□□ 0.3
VRK3-221ENST00000600284 NUP210Q8TEM1 1887 aaPredicted RBP16.91■□□□□ 0.3
VRK3-221ENST00000600284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.91■□□□□ 0.3
VRK3-221ENST00000600284 SLC38A8A6NNN8 435 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 EXOC3O60645 756 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 KINO60870 393 aaKnown RBP16.91■□□□□ 0.3
VRK3-221ENST00000600284 CHRNB1P11230 501 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 PFKFB1P16118 471 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 LMO2P25791 158 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 AP3M2P53677 418 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 MTAPQ13126 283 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 LRRC32Q14392 662 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 ZNF268Q14587 947 aaPredicted RBP16.91■□□□□ 0.3
VRK3-221ENST00000600284 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 SLC9A9Q8IVB4 645 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 GRAMD1CQ8IYS0 662 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 MAB21L3Q8N8X9 362 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 ZBTB44Q8NCP5 570 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 CCDC127Q96BQ5 260 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 SPATA17Q96L03 361 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 TDP1Q9NUW8 608 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 ZSCAN32Q9NX65 697 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 MAGED2Q9UNF1 606 aaPredicted RBP16.91■□□□□ 0.3
VRK3-221ENST00000600284 ZDHHC9Q9Y397 364 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 VPS13AQ96RL7 3174 aa16.91■□□□□ 0.3
VRK3-221ENST00000600284 FAM237AA0A1B0GTK4 181 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 SPECC1L-ADORA2AF8WAN1 911 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 PDXKO00764 312 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 GNL1P36915 607 aaPredicted RBP16.9■□□□□ 0.3
VRK3-221ENST00000600284 NRLP54845 237 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 CLDN10P78369 228 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 STK4Q13043 487 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 TRPC3Q13507 836 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 WDR72Q3MJ13 1102 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 DGKKQ5KSL6 1271 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 SDHAF4Q5VUM1 108 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 ATRIPQ8WXE1 791 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 ZNF516Q92618 1163 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 USP13Q92995 863 aaPredicted RBP16.9■□□□□ 0.3
VRK3-221ENST00000600284 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
VRK3-221ENST00000600284 SCAND2PQ9GZW5 306 aaPredicted RBP16.9■□□□□ 0.3
VRK3-221ENST00000600284 GZF1Q9H116 711 aaPredicted RBP16.9■□□□□ 0.3
VRK3-221ENST00000600284 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 CRTAC1Q9NQ79 661 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 DMAC2Q9NW81 257 aa16.9■□□□□ 0.3
VRK3-221ENST00000600284 FAM186AA6NE01 2351 aa16.89■□□□□ 0.3
VRK3-221ENST00000600284 FANCMQ8IYD8 2048 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 PATJQ8NI35 1801 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 HCRTO43612 131 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 ATP2C2O75185 946 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 KIF20AO95235 890 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 CTHP32929 405 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 CCR3P51677 355 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 TNNC1P63316 161 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 ITPRIPL2Q3MIP1 535 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 TXNDC8Q6A555 127 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 SCN4BQ8IWT1 228 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 FSIP1Q8NA03 581 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 KIAA0895Q8NCT3 520 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 MYCBPAPQ8TBZ2 947 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 ZFYVE19Q96K21 471 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 FAM83CQ9BQN1 747 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 VRTNQ9H8Y1 702 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 GTSE1Q9NYZ3 720 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 TICRRQ7Z2Z1 1910 aa16.89■□□□□ 0.29
VRK3-221ENST00000600284 LILRB5O75023 590 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 PHACTR2O75167 634 aa16.88■□□□□ 0.29
VRK3-221ENST00000600284 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms