RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ABCB6Q9NP58 842 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 ABI2Q9NYB9 513 aaPredicted RBP14.64□□□□□ -0.07
VRK3-219ENST00000600137 DNMT3BQ9UBC3 853 aaKnown RBP14.64□□□□□ -0.07
VRK3-219ENST00000600137 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 VCANP13611 3396 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 DOCK8Q8NF50 2099 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 CLDN5O00501 218 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 PRRG1O14668 218 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 TEX33O43247 280 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 NOL4O94818 638 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 BDNFP23560 247 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 TBXAS1P24557 533 aaPredicted RBP14.63□□□□□ -0.07
VRK3-219ENST00000600137 MAGEA11P43364 429 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 TUFMP49411 452 aaKnown RBP14.63□□□□□ -0.07
VRK3-219ENST00000600137 GPR15P49685 360 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 KLK7P49862 253 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 ZNF132P52740 706 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 NTHL1P78549 312 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 TWF1Q12792 350 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 MAPRE1Q15691 268 aaKnown RBP14.63□□□□□ -0.07
VRK3-219ENST00000600137 KLHDC7AQ5VTJ3 777 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.63□□□□□ -0.07
VRK3-219ENST00000600137 PPM1KQ8N3J5 372 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 SMG7Q92540 1137 aaKnown RBP14.63□□□□□ -0.07
VRK3-219ENST00000600137 TNIP3Q96KP6 325 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 ZSWIM1Q9BR11 485 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 NAA15Q9BXJ9 866 aaKnown RBP14.63□□□□□ -0.07
VRK3-219ENST00000600137 ZNF518BQ9C0D4 1074 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 POMKQ9H5K3 350 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 UBE2TQ9NPD8 197 aaPredicted RBP14.63□□□□□ -0.07
VRK3-219ENST00000600137 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
VRK3-219ENST00000600137 HCFC1R1Q9NWW0 138 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 APEX2Q9UBZ4 518 aa14.63□□□□□ -0.07
VRK3-219ENST00000600137 BECN2A8MW95 431 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 MOSPD3O75425 235 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 HMGA1P17096 107 aaKnown RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 CDK11BP21127 795 aaKnown RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 EPHA5P54756 1037 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 CBX2Q14781 532 aaPredicted RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 DDR2Q16832 855 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 PUS10Q3MIT2 529 aaKnown RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 ZNF394Q53GI3 561 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 ATAT1Q5SQI0 421 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 C4orf50Q6ZRC1 276 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 GRASPQ7Z6J2 395 aaPredicted RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 SPATA2LQ8IUW3 424 aaPredicted RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 TTC39CQ8N584 583 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 ZMIZ2Q8NF64 920 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 JAKMIP2Q96AA8 810 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 TMEM176AQ96HP8 235 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 ERGIC2Q96RQ1 377 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 GPR88Q9GZN0 384 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 GANQ9H2C0 597 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 TSPY26PQ9H489 355 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 WDR6Q9NNW5 1121 aaKnown RBP14.62□□□□□ -0.07
VRK3-219ENST00000600137 PLCB1Q9NQ66 1216 aa14.62□□□□□ -0.07
VRK3-219ENST00000600137 NCOR1O75376 2440 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 A0A1B0GTH6 734 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 EPHB6O15197 1021 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 BEST1O76090 585 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 CLSTN1O94985 981 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 CALCAP01258 141 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 CCDC130P13994 396 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 CCR2P41597 374 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 MTHFRP42898 656 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 NR1I3Q14994 352 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 AAK1Q2M2I8 961 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 MGAT5BQ3V5L5 792 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 PPP1R26Q5T8A7 1209 aaPredicted RBP14.61□□□□□ -0.07
VRK3-219ENST00000600137 SDHAF4Q5VUM1 108 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 IQCEQ6IPM2 695 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 CES5AQ6NT32 575 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 ELMSAN1Q6PJG2 1045 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 VSTM1Q6UX27 236 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 DNAJB7Q7Z6W7 309 aaPredicted RBP14.61□□□□□ -0.07
VRK3-219ENST00000600137 TMC8Q8IU68 726 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 SLC2A14Q8TDB8 520 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 GPR152Q8TDT2 470 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 TFAP2BQ92481 460 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 SHC3Q92529 594 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 PSMG2Q969U7 264 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 CYFIP2Q96F07 1278 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 KCNK16Q96T55 309 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 SMOQ99835 787 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 IL21Q9HBE4 155 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 CSNK1G1Q9HCP0 422 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 AVENQ9NQS1 362 aaPredicted RBP14.61□□□□□ -0.07
VRK3-219ENST00000600137 BDP1A6H8Y1 2624 aa14.61□□□□□ -0.07
VRK3-219ENST00000600137 TTC28Q96AY4 2481 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 LRG1P02750 347 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 PTPN2P17706 415 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 CYP27A1Q02318 531 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 MTMR3Q13615 1198 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 PTPN21Q16825 1174 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 SLC5A9Q2M3M2 681 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 PRSS36Q5K4E3 855 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 ARHGAP17Q68EM7 881 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms