RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 APEX2Q9UBZ4 518 aa21.64■■□□□ 1.05
PNKP-211ENST00000598020 ASB3Q9Y575 518 aa21.64■■□□□ 1.05
PNKP-211ENST00000598020 CCL16O15467 120 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 ACO1P21399 889 aaKnown RBP21.63■■□□□ 1.05
PNKP-211ENST00000598020 CYP2F1P24903 491 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 ZNF445P59923 1031 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 KCNMA1Q12791 1236 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 MGAT5BQ3V5L5 792 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 CEP295NLQ96MC4 621 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 KREMEN1Q96MU8 473 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 SEPT5Q99719 369 aaPredicted RBP21.63■■□□□ 1.05
PNKP-211ENST00000598020 B3GNT5Q9BYG0 378 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 TSPY26PQ9H489 355 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 PIDD1Q9HB75 910 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 WDR6Q9NNW5 1121 aaKnown RBP21.63■■□□□ 1.05
PNKP-211ENST00000598020 SIX2Q9NPC8 291 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 AVENQ9NQS1 362 aaPredicted RBP21.63■■□□□ 1.05
PNKP-211ENST00000598020 CEP72Q9P209 647 aa21.63■■□□□ 1.05
PNKP-211ENST00000598020 LGALS16A8MUM7 142 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 PES1O00541 588 aaKnown RBP21.62■■□□□ 1.05
PNKP-211ENST00000598020 IL9P15248 144 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 RAD23BP54727 409 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 EPHB3P54753 998 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 RPL10AP62906 217 aaKnown RBP21.62■■□□□ 1.05
PNKP-211ENST00000598020 CYP27A1Q02318 531 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 RRAGAQ7L523 313 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 LUZP1Q86V48 1076 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 ELMOD1Q8N336 334 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 SLC4A11Q8NBS3 891 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 KAT5Q92993 513 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 TMEM176AQ96HP8 235 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 LPIN3Q9BQK8 851 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 UBE2TQ9NPD8 197 aaPredicted RBP21.62■■□□□ 1.05
PNKP-211ENST00000598020 PRKAG3Q9UGI9 489 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 CDH22Q9UJ99 828 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 CNTN6Q9UQ52 1028 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 DENND4AQ7Z401 1863 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 NOTCH4Q99466 2003 aa21.62■■□□□ 1.05
PNKP-211ENST00000598020 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 PTPN2P17706 415 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 ATF6P18850 670 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 TPM4P67936 248 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 TJAP1Q5JTD0 557 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 FKBP15Q5T1M5 1219 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 PAQR9Q6ZVX9 377 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 FUKQ8N0W3 1084 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 LEMD2Q8NC56 503 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 ZNF512Q96ME7 567 aaPredicted RBP21.61■■□□□ 1.05
PNKP-211ENST00000598020 HNRNPABQ99729 332 aaKnown RBP21.61■■□□□ 1.05
PNKP-211ENST00000598020 PHF7Q9BWX1 381 aaPredicted RBP21.61■■□□□ 1.05
PNKP-211ENST00000598020 POMKQ9H5K3 350 aa21.61■■□□□ 1.05
PNKP-211ENST00000598020 DNMT3BQ9UBC3 853 aaKnown RBP21.61■■□□□ 1.05
PNKP-211ENST00000598020 ATP8B3O60423 1300 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 SOAT2O75908 522 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 BDNFP23560 247 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 CDR1P51861 262 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 EPHA5P54756 1037 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 MFAP3P55082 362 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 ORC1Q13415 861 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 IQCEQ6IPM2 695 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 GRASPQ7Z6J2 395 aaPredicted RBP21.6■■□□□ 1.05
PNKP-211ENST00000598020 ITIH5Q86UX2 942 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 C12orf29Q8N999 325 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 PSMG2Q969U7 264 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 C8orf48Q96LL4 319 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 PLCB1Q9NQ66 1216 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 KIAA1257Q9ULG3 409 aa21.6■■□□□ 1.05
PNKP-211ENST00000598020 CLUHO75153 1309 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 TRIM66O15016 1216 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 PAEPP09466 180 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 RFX1P22670 979 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 ZNF132P52740 706 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 VEPH1Q14D04 833 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 ZNF394Q53GI3 561 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 KLHDC7AQ5VTJ3 777 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 DNAJB7Q7Z6W7 309 aaPredicted RBP21.59■■□□□ 1.05
PNKP-211ENST00000598020 FAM35AQ86V20 835 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 CYFIP2Q96F07 1278 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 SMARCD1Q96GM5 515 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 SPATA17Q96L03 361 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 HEXIM2Q96MH2 286 aaKnown RBP21.59■■□□□ 1.05
PNKP-211ENST00000598020 ERGIC2Q96RQ1 377 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 LRRC3Q9BY71 257 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 ZNF518BQ9C0D4 1074 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 USTQ9Y2C2 406 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 DAAM1Q9Y4D1 1078 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 PCDHB4Q9Y5E5 795 aa21.59■■□□□ 1.05
PNKP-211ENST00000598020 TCF20Q9UGU0 1960 aaKnown RBP21.58■■□□□ 1.05
PNKP-211ENST00000598020 GOLGA6L19H0YKK7 550 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 CLDN5O00501 218 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 MICAL2O94851 1124 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 RHOP08100 348 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 APBA1Q02410 837 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 DDR2Q16832 855 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 PABPC1LQ4VXU2 614 aaKnown RBP21.58■■□□□ 1.05
PNKP-211ENST00000598020 ARHGAP17Q68EM7 881 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 GJB7Q6PEY0 223 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 TMEM270Q6UE05 265 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 SLC2A14Q8TDB8 520 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 SHC3Q92529 594 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms