RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NLRP12P59046 1061 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 OSTNP61366 133 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 TARDBPQ13148 414 aaKnown RBP eCLIP7.03□□□□□ -1.28
DNMT1-222ENST00000590619 MYBPC2Q14324 1141 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 ZNF77Q15935 545 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 DCAF4L1Q3SXM0 396 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 MGAT5BQ3V5L5 792 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
DNMT1-222ENST00000590619 C4orf17Q53FE4 359 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 C6orf118Q5T5N4 469 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 MOXD1Q6UVY6 613 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 ADGRG2Q8IZP9 1017 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 OXER1Q8TDS5 423 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 RUFY2Q8WXA3 655 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 BSNDQ8WZ55 320 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 DNASE2BQ8WZ79 361 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 TMEM176AQ96HP8 235 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 TCEANC2Q96MN5 208 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 ACAP3Q96P50 834 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 GCNAQ96QF7 691 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 SLC22A12Q96S37 553 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 HSD17B14Q9BPX1 270 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 NRSN2Q9GZP1 204 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 CCDC113Q9H0I3 377 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 CPNE5Q9HCH3 593 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 KCNMB3Q9NPA1 279 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 GMIPQ9P107 970 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 VPS54Q9P1Q0 977 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 HSFX1Q9UBD0 423 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 SUSD2Q9UGT4 822 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 SRPK3Q9UPE1 567 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 CREBBPQ92793 2442 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 MYO9AB2RTY4 2548 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 NID2Q14112 1375 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 COL5A1P20908 1838 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 A0A1B0GTW7 788 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 GOLGA8AA7E2F4 631 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 GOLGA8BA8MQT2 603 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 M0R2N6 131 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 TERTO14746 1132 aaKnown RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 SLC27A2O14975 620 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 FLRT2O43155 660 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 LYPLA2O95372 231 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 HSPA4P34932 840 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 GRM5P41594 1212 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 MATKP42679 507 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 TNFRSF4P43489 277 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 YARSP54577 528 aaKnown RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 ZXDBP98169 803 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 FAM160A1Q05DH4 1040 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 DMP1Q13316 513 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 UBAP2LQ14157 1087 aaKnown RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 VEPH1Q14D04 833 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 SUZ12Q15022 739 aaKnown RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 TAF12Q16514 161 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 SYCP2LQ5T4T6 812 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 ATF7IP2Q5U623 682 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 NCAPH2Q6IBW4 605 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 ZNF574Q6ZN55 896 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 PRICKLE2Q7Z3G6 844 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 ERICH1Q86X53 443 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 ZBTB8OSQ8IWT0 167 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 SMC5Q8IY18 1101 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 TTC16Q8NEE8 873 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 PIGOQ8TEQ8 1089 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 SEPT5Q99719 369 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 PTPRHQ9HD43 1115 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 CALCOCO1Q9P1Z2 691 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 HCN2Q9UL51 889 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 CYP8B1Q9UNU6 501 aa7.02□□□□□ -1.29
DNMT1-222ENST00000590619 UBR5O95071 2799 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-222ENST00000590619 A0A1W2PQF6 199 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 MYMKA6NI61 221 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 ENO4A6NNW6 628 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 KCNK3O14649 394 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 ZNF217O75362 1048 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 KAT7O95251 611 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 CER1O95813 267 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 HAPLN1P10915 354 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 XRCC6P12956 609 aaKnown RBP eCLIP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 AARSP49588 968 aaKnown RBP eCLIP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 NLRP5P59047 1200 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 NUCB1Q02818 461 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 NECTIN1Q15223 517 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 ZC2HC1CQ53FD0 456 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 WDR45BQ5MNZ6 344 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 OVOS1Q6IE37 1185 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 ARMCX5Q6P1M9 558 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 IL27RAQ6UWB1 636 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 USP49Q70CQ1 688 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 USP37Q86T82 979 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 LRRTM3Q86VH5 581 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 OR10T2Q8NGX3 314 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 SH3RF2Q8TEC5 729 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 TSC1Q92574 1164 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 MRPS31Q92665 395 aaKnown RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 FOXJ1Q92949 421 aa7.01□□□□□ -1.29
DNMT1-222ENST00000590619 NAF1Q96HR8 494 aaKnown RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 YTHDC1Q96MU7 727 aaKnown RBP7.01□□□□□ -1.29
DNMT1-222ENST00000590619 PNKPQ96T60 521 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms