RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 AVPR1AP37288 418 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 GPR15P49685 360 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 MLLT6P55198 1093 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-219ENST00000588411 PLCB2Q00722 1185 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 DDR2Q16832 855 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 KRBA2Q6ZNG9 492 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 SCN4BQ8IWT1 228 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 CELF5Q8N6W0 485 aaKnown RBP23.32■■□□□ 1.32
CIRBP-219ENST00000588411 FAM3CQ92520 227 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 RSPRY1Q96DX4 576 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 KCTD10Q9H3F6 313 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 DMAC2Q9NW81 257 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 FRMD4BQ9Y2L6 1034 aa23.32■■□□□ 1.32
CIRBP-219ENST00000588411 LAMTOR5O43504 91 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 HCRTO43612 131 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 NOL4O94818 638 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 CST3P01034 146 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-219ENST00000588411 PDGFRBP09619 1106 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 LMO2P25791 158 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 RPS9P46781 194 aaKnown RBP23.31■■□□□ 1.32
CIRBP-219ENST00000588411 KPNA1P52294 538 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-219ENST00000588411 PSMC1P62191 440 aaKnown RBP23.31■■□□□ 1.32
CIRBP-219ENST00000588411 SDHAF4Q5VUM1 108 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 VSTM1Q6UX27 236 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 CMTM8Q8IZV2 173 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 OR6B3Q8NGW1 331 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 BPIFB1Q8TDL5 484 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 PARD3BQ8TEW8 1205 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 MYLPFQ96A32 169 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 CLDN23Q96B33 292 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 TRMT2BQ96GJ1 504 aaKnown RBP23.31■■□□□ 1.32
CIRBP-219ENST00000588411 CEP295NLQ96MC4 621 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 SEMA4AQ9H3S1 761 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 C8orf33Q9H7E9 229 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-219ENST00000588411 NDRG2Q9UN36 371 aaKnown RBP23.31■■□□□ 1.32
CIRBP-219ENST00000588411 NCANO14594 1321 aa23.31■■□□□ 1.32
CIRBP-219ENST00000588411 GOLGA6L4A6NEF3 574 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 SLC38A8A6NNN8 435 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 ARNTLO00327 626 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 RHOBTB3O94955 611 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 F11P03951 625 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 ANXA13P27216 316 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 CASP4P49662 377 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 MYL6P60660 151 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 NUCB2P80303 420 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 CYP27A1Q02318 531 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 DPYDQ12882 1025 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 GPIHBP1Q8IV16 184 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 MAB21L3Q8N8X9 362 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 MYCBPAPQ8TBZ2 947 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 ZNF516Q92618 1163 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 MYRFLQ96LU7 910 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 MRPL45Q9BRJ2 306 aaKnown RBP23.3■■□□□ 1.32
CIRBP-219ENST00000588411 IER2Q9BTL4 223 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 SLC46A2Q9BY10 475 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 KIF9Q9HAQ2 790 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 EHD2Q9NZN4 543 aa23.3■■□□□ 1.32
CIRBP-219ENST00000588411 NXF1Q9UBU9 619 aaKnown RBP23.3■■□□□ 1.32
CIRBP-219ENST00000588411 ATP2C2O75185 946 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 ZNF202O95125 648 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 PRAMEF12O95522 483 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 CLDN10P78369 228 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 ZNF699Q32M78 642 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 CEP135Q66GS9 1140 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 MON1AQ86VX9 555 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 GZF1Q9H116 711 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-219ENST00000588411 CRTAC1Q9NQ79 661 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 FBXO4Q9UKT5 387 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 MIA3Q5JRA6 1907 aa23.29■■□□□ 1.32
CIRBP-219ENST00000588411 PRR23AA6NEV1 266 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 LRRIQ3A6PVS8 624 aaPredicted RBP23.28■■□□□ 1.32
CIRBP-219ENST00000588411 TRIM66O15016 1216 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 PRR29P0C7W0 189 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 SP9P0CG40 484 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 P4HA1P13674 534 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 GRIK1P39086 918 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 NCOA4Q13772 614 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 KCNB1Q14721 858 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 CCDC142Q17RM4 750 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 ZNF667Q5HYK9 610 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 TDRD10Q5VZ19 366 aaKnown RBP23.28■■□□□ 1.32
CIRBP-219ENST00000588411 TMEM150AQ86TG1 271 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 TMC2Q8TDI7 906 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 SPATA17Q96L03 361 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 XYLT2Q9H1B5 865 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 GOLPH3LQ9H4A5 285 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 VRTNQ9H8Y1 702 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 GDPD2Q9HCC8 539 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 TRAF3IP3Q9Y228 551 aa23.28■■□□□ 1.32
CIRBP-219ENST00000588411 BDNFP23560 247 aa23.27■■□□□ 1.32
CIRBP-219ENST00000588411 CCNE1P24864 410 aa23.27■■□□□ 1.32
CIRBP-219ENST00000588411 RPL13P26373 211 aaKnown RBP23.27■■□□□ 1.32
CIRBP-219ENST00000588411 ZNF528Q3MIS6 628 aa23.27■■□□□ 1.32
CIRBP-219ENST00000588411 MDH1BQ5I0G3 518 aa23.27■■□□□ 1.32
CIRBP-219ENST00000588411 RALGPS2Q86X27 583 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-219ENST00000588411 STKLD1Q8NE28 680 aa23.27■■□□□ 1.32
CIRBP-219ENST00000588411 PLEKHO2Q8TD55 490 aa23.27■■□□□ 1.32
CIRBP-219ENST00000588411 PCED1BQ96HM7 432 aa23.27■■□□□ 1.32
CIRBP-219ENST00000588411 SMG9Q9H0W8 520 aaKnown RBP23.27■■□□□ 1.32
CIRBP-219ENST00000588411 TDP1Q9NUW8 608 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms