RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SNX24Q9Y343 169 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PCDHB2Q9Y5E7 798 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 GBF1Q92538 1859 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 TTLL13PA6NNM8 815 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 HOXA2O43364 376 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 EDN1P05305 212 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 MYOGP15173 224 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 IBSPP21815 317 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-203ENST00000588210 HNRNPH1P31943 449 aaKnown RBP15.49■□□□□ 0.07
CCDC43-203ENST00000588210 ACTN3Q08043 901 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-203ENST00000588210 IFT88Q13099 833 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 BYSLQ13895 437 aaKnown RBP15.49■□□□□ 0.07
CCDC43-203ENST00000588210 DENND2CQ68D51 928 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 AADACL2Q6P093 401 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 TATDN2Q93075 761 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 PGBD4Q96DM1 585 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 C18orf8Q96DM3 657 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 PCDHB18PQ96TA0 734 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 ADPGKQ9BRR6 497 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 TRIM6Q9C030 488 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-203ENST00000588210 RC3H2Q9HBD1 1191 aaKnown RBP15.49■□□□□ 0.07
CCDC43-203ENST00000588210 TNFSF13BQ9Y275 285 aa15.49■□□□□ 0.07
CCDC43-203ENST00000588210 TMEM265A0A087WTH1 108 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 COMTP21964 271 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 PLTPP55058 493 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 ATF7IP2Q5U623 682 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 MRPL10Q7Z7H8 261 aaKnown RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 CROCCP2Q86T23 111 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 NOP9Q86U38 636 aaKnown RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 FBXO25Q8TCJ0 367 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 SP7Q8TDD2 431 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 ACO2Q99798 780 aaKnown RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 EIF2AQ9BY44 585 aaKnown RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 TMEM117Q9H0C3 514 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 PDZD7Q9H5P4 517 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 ACTR5Q9H9F9 607 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 SLC28A3Q9HAS3 691 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 TBX20Q9UMR3 447 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 PCDHA3Q9Y5H8 950 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 SHBGP04278 402 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 CA3P07451 260 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 QPCTQ16769 361 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 RNF187Q5TA31 235 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 TTC27Q6P3X3 843 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 ZPBP2Q6X784 338 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 APBB1IPQ7Z5R6 666 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 CDR2LQ86X02 465 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 RNF169Q8NCN4 708 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 RSPH1Q8WYR4 309 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 SHC3Q92529 594 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 KAT5Q92993 513 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 HVCN1Q96D96 273 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 KREMEN1Q96MU8 473 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 FAM129AQ9BZQ8 928 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 NKX2-4Q9H2Z4 354 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 MTRF1LQ9UGC7 380 aaKnown RBP15.48■□□□□ 0.07
CCDC43-203ENST00000588210 IPPQ9Y573 584 aa15.48■□□□□ 0.07
CCDC43-203ENST00000588210 COL4A6Q14031 1691 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 H0YHG0 523 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 CYP1A2P05177 515 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 ADRB2P07550 413 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 RPL21P46778 160 aaKnown RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 MESDQ14696 234 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 ERMARDQ5T6L9 678 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 CMTR2Q8IYT2 770 aaKnown RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 HACE1Q8IYU2 909 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 ZDHHC14Q8IZN3 488 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 C12orf50Q8NA57 414 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 SMG8Q8ND04 991 aaKnown RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 RNF25Q96BH1 459 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 SEC16BQ96JE7 1060 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 XPO6Q96QU8 1125 aaKnown RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 TMEM109Q9BVC6 243 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 TARS2Q9BW92 718 aaKnown RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 PTPRHQ9HD43 1115 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 FAM170AA1A519 330 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 LCHNA4D1U4 455 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 TOM1L1O75674 476 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 NPTXRO95502 500 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 FGFR1P11362 822 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 FMO1Q01740 532 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 BTG3Q14201 252 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 DCAF4L1Q3SXM0 396 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 PPP2R2DQ66LE6 453 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 CCDC137Q6PK04 289 aaKnown RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 CCDC121Q6ZUS5 278 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 SLC13A5Q86YT5 568 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 MAP4K3Q8IVH8 894 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 ABI1Q8IZP0 508 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 CACNA2D3Q8IZS8 1091 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 ZNF564Q8TBZ8 553 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-203ENST00000588210 UBN1Q9NPG3 1134 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 GTF3C4Q9UKN8 822 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 MTUS1Q9ULD2 1270 aa15.47■□□□□ 0.07
CCDC43-203ENST00000588210 PIGRP01833 764 aa15.46■□□□□ 0.07
CCDC43-203ENST00000588210 DRD4P21917 467 aa15.46■□□□□ 0.07
CCDC43-203ENST00000588210 MMP13P45452 471 aa15.46■□□□□ 0.07
CCDC43-203ENST00000588210 MFAP3P55082 362 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms