RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 ACCSQ96QU6 501 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 SLC22A12Q96S37 553 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 CBWD1Q9BRT8 395 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 FGFBP2Q9BYJ0 223 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 CCSER1Q9C0I3 900 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 ARRDC1-AS1Q9H2J1 176 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 ST6GALNAC4Q9H4F1 302 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 SMOC1Q9H4F8 434 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 UPF2Q9HAU5 1272 aaKnown RBP6.9□□□□□ -1.3
SDF2-205ENST00000587629 PDE11AQ9HCR9 933 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 DDX43Q9NXZ2 648 aaKnown RBP6.9□□□□□ -1.3
SDF2-205ENST00000587629 OBP2AQ9NY56 170 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 RBAKQ9NYW8 714 aaPredicted RBP6.9□□□□□ -1.3
SDF2-205ENST00000587629 CCDC39Q9UFE4 941 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 FBXO2Q9UK22 296 aaPredicted RBP6.9□□□□□ -1.3
SDF2-205ENST00000587629 GTF3C4Q9UKN8 822 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 L1RE1Q9UN81 338 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 SLC8A2Q9UPR5 921 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 EXOC7Q9UPT5 735 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 SNX9Q9Y5X1 595 aa6.9□□□□□ -1.3
SDF2-205ENST00000587629 ANK1P16157 1881 aa6.9□□□□□ -1.31
SDF2-205ENST00000587629 SCN1AP35498 2009 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 SLC30A4O14863 429 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 RNF40O75150 1001 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 RPP40O75818 363 aaKnown RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 PPP1R37O75864 691 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 PRPF6O94906 941 aaKnown RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 PAPSS2O95340 614 aaPredicted RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 CKMP06732 381 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 PDGFRBP09619 1106 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 CSH1P0DML2 217 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 CSH2P0DML3 217 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 GAP43P17677 238 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 WEE1P30291 646 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 CNR2P34972 360 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 TXLNAP40222 546 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 PNPLA4P41247 253 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 STAT6P42226 847 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 GALK1P51570 392 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 PSMC1P62191 440 aaKnown RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 SMARCB1Q12824 385 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 PSMD2Q13200 908 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 AASDHQ4L235 1098 aaPredicted RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 L1TD1Q5T7N2 865 aaKnown RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 MON1AQ86VX9 555 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 WDR5BQ86VZ2 330 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 OSTM1Q86WC4 334 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 SPATA2LQ8IUW3 424 aaPredicted RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 SYNPOQ8N3V7 929 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 PDILTQ8N807 584 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 NETO1Q8TDF5 533 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 CACTINQ8WUQ7 758 aaKnown RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 HPS3Q969F9 1004 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 HVCN1Q96D96 273 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 DNAJC19Q96DA6 116 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 P2RY13Q9BPV8 354 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 STRA6Q9BX79 667 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 MTMR12Q9C0I1 747 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 RXFP3Q9NSD7 469 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 PANK4Q9NVE7 773 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 DUS2Q9NX74 493 aaKnown RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 STK17AQ9UEE5 414 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 INVSQ9Y283 1065 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 SRPRBQ9Y5M8 271 aaKnown RBP6.89□□□□□ -1.31
SDF2-205ENST00000587629 WNT6Q9Y6F9 365 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 TSC2P49815 1807 aa6.89□□□□□ -1.31
SDF2-205ENST00000587629 SPTBN2O15020 2390 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 KIF26AQ9ULI4 1882 aaPredicted RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 PTPRJQ12913 1337 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 A0A087X0B3 334 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 C2orf78A6NCI8 922 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 TRDMT1O14717 391 aaKnown RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 SCAMP3O14828 347 aaKnown RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 DCLK1O15075 740 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 LRP3O75074 770 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 ATG13O75143 517 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 TADA3O75528 432 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 ADRB1P08588 477 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 TMEM191BP0C7N4 346 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 LMO2P25791 158 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 DDX6P26196 483 aaKnown RBP eCLIP6.88□□□□□ -1.31
SDF2-205ENST00000587629 HOXA6P31267 233 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 GJA4P35212 333 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 SEC13P55735 322 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 RPL10AP62906 217 aaKnown RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 RBP5P82980 135 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 MYL7Q01449 175 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 RESTQ13127 1097 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 MTF1Q14872 753 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 NFE2Q16621 373 aaPredicted RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 SOWAHAQ2M3V2 549 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 INTS6LQ5JSJ4 861 aaKnown RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 IL31Q6EBC2 164 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 TMEM92Q6UXU6 159 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 CACNA2D4Q7Z3S7 1137 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 NT5DC4Q86YG4 428 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 BRSK2Q8IWQ3 736 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 ADGRF2Q8IZF7 708 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms