RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 GPR88Q9GZN0 384 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 SEMA4GQ9NTN9 838 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 GTSE1Q9NYZ3 720 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 MAFFQ9ULX9 164 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 UBQLN1Q9UMX0 589 aaKnown RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 TTC26A0AVF1 554 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 MYBPHLA2RUH7 354 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 OR6C75A6NL08 312 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 LACTBL1A8MY62 500 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 LAD1O00515 517 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 SLC30A4O14863 429 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 PRAMEF12O95522 483 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 CLTAP09496 248 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 U2AF2P26368 475 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 GABRR2P28476 465 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 WEE1P30291 646 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 PRPHP41219 470 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 ALDH1A3P47895 512 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 GSK3AP49840 483 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 SMTNP53814 917 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 EPHB3P54753 998 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 NCKAP1LP55160 1127 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 SH3BP2P78314 561 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 CYP4F8P98187 520 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 PPP2R3AQ06190 1150 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 GPR17Q13304 367 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 PON2Q15165 354 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 ZBTB6Q15916 424 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 PPM1JQ5JR12 505 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 GPR158Q5T848 1215 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 OVOS1Q6IE37 1185 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 CENPPQ6IPU0 288 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 DTHD1Q6ZMT9 781 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 USP37Q86T82 979 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 LONP2Q86WA8 852 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 ATAD1Q8NBU5 361 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 E2F7Q96AV8 911 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 BICD1Q96G01 975 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 MSANTD3Q96H12 275 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 LPIN3Q9BQK8 851 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 ATXN3LQ9H3M9 355 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 C8orf33Q9H7E9 229 aaPredicted RBP8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 PLEKHA5Q9HAU0 1116 aa8.45□□□□□ -1.06
SMCHD1-210ENST00000583800 ANAPC1Q9H1A4 1944 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 ANKRD62A6NC57 917 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 K7ENM7 598 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 HNRNPDLO14979 420 aaKnown RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 FAM189A1O60320 539 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 LRP3O75074 770 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 PAPSS2O95340 614 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 NFICP08651 508 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 PLA2G4BP0C869 781 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 TYMPP19971 482 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 CYP3A5P20815 502 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 LIG4P49917 911 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 SLC12A3P55017 1021 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 MLLT6P55198 1093 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 ATP2C1P98194 919 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 TNK2Q07912 1038 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 MYBPC2Q14324 1141 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 CSRP2Q16527 193 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 ARHGAP29Q52LW3 1261 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 DGKKQ5KSL6 1271 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 HYIQ5T013 277 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 PKN3Q6P5Z2 889 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 C1orf228Q6PIY5 440 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 CAPN12Q6ZSI9 719 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 HAUS6Q7Z4H7 955 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 DNAJB7Q7Z6W7 309 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 NOP9Q86U38 636 aaKnown RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 RALGPS2Q86X27 583 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 SYT2Q8N9I0 419 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 OR10T2Q8NGX3 314 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 ADAM32Q8TC27 787 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 BPIFB1Q8TDL5 484 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 PSMG2Q969U7 264 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 SENP8Q96LD8 212 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 ZSCAN31Q96LW9 406 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 SEPT5Q99719 369 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 OXCT2Q9BYC2 517 aaPredicted RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 SMG9Q9H0W8 520 aaKnown RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 DOLKQ9UPQ8 538 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 PCDHGA11Q9Y5H2 935 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 HELZP42694 1942 aaKnown RBP8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 CHD8Q9HCK8 2581 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 NUP205Q92621 2012 aa8.44□□□□□ -1.06
SMCHD1-210ENST00000583800 VWA3AA6NCI4 1184 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 OGTO15294 1046 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 XPOTO43592 962 aaKnown RBP8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 ODC1P11926 461 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 ATF6P18850 670 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 CNR2P34972 360 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 PXNP49023 591 aaPredicted RBP8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 LILRA4P59901 499 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 CCINQ13939 588 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 CCDC6Q16204 474 aa8.43□□□□□ -1.06
SMCHD1-210ENST00000583800 MGAT5BQ3V5L5 792 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms