RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 STK36Q9NRP7 1315 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 FREM2Q5SZK8 3169 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 PCNX2A6NKB5 2137 aa12.02□□□□□ -0.48
CASC3-208ENST00000583649 LOC400499M0QZD8 3231 aa12.02□□□□□ -0.48
CASC3-208ENST00000583649 KIF26AQ9ULI4 1882 aaPredicted RBP12.02□□□□□ -0.48
CASC3-208ENST00000583649 ASCC3Q8N3C0 2202 aaKnown RBP12.02□□□□□ -0.48
CASC3-208ENST00000583649 E9PAM4 449 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 J3QKU1 62 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 K7EQS6 105 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 SLC9A3R1O14745 358 aaPredicted RBP12.02□□□□□ -0.49
CASC3-208ENST00000583649 KLF8O95600 359 aaPredicted RBP12.02□□□□□ -0.49
CASC3-208ENST00000583649 F11P03951 625 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 HAPLN1P10915 354 aaPredicted RBP12.02□□□□□ -0.49
CASC3-208ENST00000583649 PLA2G2AP14555 144 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 PROZP22891 400 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 NPTX2P47972 431 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 TSPY1Q01534 308 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 STK3Q13188 491 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 TRIM29Q14134 588 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 NFE2Q16621 373 aaPredicted RBP12.02□□□□□ -0.49
CASC3-208ENST00000583649 EML3Q32P44 896 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 RUFY3Q7L099 469 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 TMPRSS7Q7RTY8 843 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
CASC3-208ENST00000583649 TXNDC5Q8NBS9 432 aaKnown RBP12.02□□□□□ -0.49
CASC3-208ENST00000583649 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 FOXJ1Q92949 421 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 KCNB2Q92953 911 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 SENP8Q96LD8 212 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 MTMR9Q96QG7 549 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 PNKPQ96T60 521 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 PI4K2AQ9BTU6 479 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 BHMT2Q9H2M3 363 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 PCDHB5Q9Y5E4 795 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 ITPR1Q14643 2758 aa12.02□□□□□ -0.49
CASC3-208ENST00000583649 ABCA7Q8IZY2 2146 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 TCRBV21S2A2A0A5A6 115 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 H0YCG3 227 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 RRP8O43159 456 aaKnown RBP12.01□□□□□ -0.49
CASC3-208ENST00000583649 NDUFS2O75306 463 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 CDC45O75419 566 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 MED24O75448 989 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 CYP11A1P05108 521 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 NMT1P30419 496 aaKnown RBP12.01□□□□□ -0.49
CASC3-208ENST00000583649 TIE1P35590 1138 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 EIF2DP41214 584 aaKnown RBP12.01□□□□□ -0.49
CASC3-208ENST00000583649 LILRA4P59901 499 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 CYP4F3Q08477 520 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 ZNF77Q15935 545 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 MAP7D1Q3KQU3 841 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 WDR45BQ5MNZ6 344 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 SDE2Q6IQ49 451 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 IL27RAQ6UWB1 636 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 ZPBP2Q6X784 338 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 CD302Q8IX05 232 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 ALLCQ8N6M5 410 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 KIAA1958Q8N8K9 716 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 EZH1Q92800 747 aaPredicted RBP12.01□□□□□ -0.49
CASC3-208ENST00000583649 CAMK1GQ96NX5 476 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 DCBLD2Q96PD2 775 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 ARHGAP28Q9P2N2 729 aa12.01□□□□□ -0.49
CASC3-208ENST00000583649 SMG1Q96Q15 3661 aaKnown RBP12.01□□□□□ -0.49
CASC3-208ENST00000583649 ATG2BQ96BY7 2078 aa12□□□□□ -0.49
CASC3-208ENST00000583649 PRPF40AO75400 957 aaKnown RBP12□□□□□ -0.49
CASC3-208ENST00000583649 CXCL8P10145 99 aa12□□□□□ -0.49
CASC3-208ENST00000583649 PFKLP17858 780 aa12□□□□□ -0.49
CASC3-208ENST00000583649 TNFRSF4P43489 277 aa12□□□□□ -0.49
CASC3-208ENST00000583649 SUZ12Q15022 739 aaKnown RBP12□□□□□ -0.49
CASC3-208ENST00000583649 NAIF1Q69YI7 327 aaPredicted RBP12□□□□□ -0.49
CASC3-208ENST00000583649 IL17RCQ8NAC3 791 aa12□□□□□ -0.49
CASC3-208ENST00000583649 SH3RF2Q8TEC5 729 aa12□□□□□ -0.49
CASC3-208ENST00000583649 BICD1Q96G01 975 aa12□□□□□ -0.49
CASC3-208ENST00000583649 TRMT2BQ96GJ1 504 aaKnown RBP12□□□□□ -0.49
CASC3-208ENST00000583649 TIPINQ9BVW5 301 aa12□□□□□ -0.49
CASC3-208ENST00000583649 RAB34Q9BZG1 259 aa12□□□□□ -0.49
CASC3-208ENST00000583649 RPF1Q9H9Y2 349 aaKnown RBP12□□□□□ -0.49
CASC3-208ENST00000583649 FSCN3Q9NQT6 498 aa12□□□□□ -0.49
CASC3-208ENST00000583649 EHD2Q9NZN4 543 aa12□□□□□ -0.49
CASC3-208ENST00000583649 LAMA5O15230 3695 aa12□□□□□ -0.49
CASC3-208ENST00000583649 IGSF10Q6WRI0 2623 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 TTC26A0AVF1 554 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 TRABD2BA6NFA1 517 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 REC8O95072 547 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 KAT7O95251 611 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 CER1O95813 267 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 ADH1CP00326 375 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 PRB1P04280 392 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 NFICP08651 508 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 HLA-EP13747 358 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 TCF3P15923 654 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 HMGA1P17096 107 aaKnown RBP11.99□□□□□ -0.49
CASC3-208ENST00000583649 HDCP19113 662 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 CCT6AP40227 531 aaKnown RBP11.99□□□□□ -0.49
CASC3-208ENST00000583649 GRIA2P42262 883 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 SPAG1Q07617 926 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 MCL1Q07820 350 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 USP4Q13107 963 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 RESTQ13127 1097 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms