RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 PCSK1P29120 753 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 HOXD13P35453 343 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 MAGEA11P43364 429 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 LHX1P48742 406 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 SIM2Q14190 667 aaPredicted RBP17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 TXNDC8Q6A555 127 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 FSTL4Q6MZW2 842 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 ADGRF2Q8IZF7 708 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 SYCP3Q8IZU3 236 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 CSGALNACT2Q8N6G5 542 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 MRPS31Q92665 395 aaKnown RBP17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 CEP295NLQ96MC4 621 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 RTKNQ9BST9 563 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 CDV3Q9UKY7 258 aaKnown RBP17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 USP18Q9UMW8 372 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 SNX9Q9Y5X1 595 aa17.27■□□□□ 0.36
TNFAIP1-206ENST00000583213 GOLGA8IPA6NC78 632 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 GOLGA8JA6NMD2 632 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 PRPF6O94906 941 aaKnown RBP17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 TCF3P15923 654 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 ACAT1P24752 427 aaKnown RBP17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 CEBPZQ03701 1054 aaKnown RBP17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 SPEM2Q0P670 501 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 BFSP1Q12934 665 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 USP4Q13107 963 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 PDGFRLQ15198 375 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 ZNF77Q15935 545 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 CSRP2Q16527 193 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 DDR2Q16832 855 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 CCDC142Q17RM4 750 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 PKN3Q6P5Z2 889 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 EPM2AIP1Q7L775 607 aaPredicted RBP17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 CCDC65Q8IXS2 484 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 LINC00301Q8NCQ3 95 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 STKLD1Q8NE28 680 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 GLIS3Q8NEA6 775 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 KBTBD7Q8WVZ9 684 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 CUEDC2Q9H467 287 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 GTF3C4Q9UKN8 822 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 KIAA1549LQ6ZVL6 1849 aa17.26■□□□□ 0.35
TNFAIP1-206ENST00000583213 HELZP42694 1942 aaKnown RBP17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 FOXD2O60548 495 aaPredicted RBP17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 TMEM191BP0C7N4 346 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 FAM160A1Q05DH4 1040 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 SRSF5Q13243 272 aaKnown RBP17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 SURF1Q15526 300 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 LPAL2Q16609 132 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 SDHAF4Q5VUM1 108 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 TRIM68Q6AZZ1 485 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 PRR23BQ6ZRT6 265 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 OR5B17Q8NGF7 314 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 NETO1Q8TDF5 533 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 SPATA17Q96L03 361 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 PCIF1Q9H4Z3 704 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 SEMA4GQ9NTN9 838 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 KMT2BQ9UMN6 2715 aaPredicted RBP17.25■□□□□ 0.35
TNFAIP1-206ENST00000583213 CNOT1A5YKK6 2376 aaKnown RBP17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 EML5Q05BV3 1969 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 CHD8Q9HCK8 2581 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 ZNF233A6NK53 670 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 SLC30A4O14863 429 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 HCRTO43612 131 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 STX6O43752 255 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 PPP6R2O75170 966 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 ARSAP15289 507 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 HOXC13P31276 330 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 AMPD2Q01433 879 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 EHHADHQ08426 723 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 GRSF1Q12849 480 aaKnown RBP eCLIP17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 MYO1EQ12965 1108 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 MTF1Q14872 753 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 VSTM1Q6UX27 236 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 STXBP4Q6ZWJ1 553 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 CBWD2Q8IUF1 395 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 WDR49Q8IV35 697 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 OSCP1Q8WVF1 389 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 HPDLQ96IR7 371 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 ANKRD36BP1Q96IX9 119 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 LRRC27Q9C0I9 530 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 KIAA1586Q9HCI6 787 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 CDH9Q9ULB4 789 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 MAGED2Q9UNF1 606 aaPredicted RBP17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 RALGAPA1Q6GYQ0 2036 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 MYO16Q9Y6X6 1858 aa17.24■□□□□ 0.35
TNFAIP1-206ENST00000583213 ATG13O75143 517 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 AKAP3O75969 853 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 KRT19P08727 400 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 PFKLP17858 780 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 DRD1P21728 446 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 WARSP23381 471 aaKnown RBP17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 DUOXA2Q1HG44 320 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 C4orf50Q6ZRC1 276 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 PRR23CQ6ZRP0 262 aa17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP1-206ENST00000583213 SPATA2LQ8IUW3 424 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms