RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 GRM5P41594 1212 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CCDC6Q16204 474 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 AMHR2Q16671 573 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CCDC40Q4G0X9 1142 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TCP11X2Q5H9J9 407 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CDKAL1Q5VV42 579 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DAB2IPQ5VWQ8 1189 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SARM1Q6SZW1 724 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PRSS55Q6UWB4 352 aaPredicted RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 C11orf57Q6ZUT1 292 aaPredicted RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FMNL3Q8IVF7 1028 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DHX40Q8IX18 779 aaKnown RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 AOPEPQ8N6M6 819 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TMC2Q8TDI7 906 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CACTINQ8WUQ7 758 aaKnown RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DEPDC1BQ8WUY9 529 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GAB3Q8WWW8 586 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FNBP1Q96RU3 617 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TTPALQ9BTX7 342 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 EDEM2Q9BV94 578 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 KIFC3Q9BVG8 833 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TARS2Q9BW92 718 aaKnown RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FAM124BQ9H5Z6 455 aaPredicted RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ANKFY1Q9P2R3 1169 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GIT1Q9Y2X7 761 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NEUROG3Q9Y4Z2 214 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 IPPQ9Y573 584 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GTPBP10A4D1E9 387 aaKnown RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KCNJ18B7U540 433 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GIPC1O14908 333 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TADA2AO75478 443 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RPP40O75818 363 aaKnown RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 AKAP3O75969 853 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SERPINC1P01008 464 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RHOP08100 348 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CEACAM1P13688 526 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ZNF18P17022 549 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PSMC3P17980 439 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CSRP1P21291 193 aaKnown RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CLDN10P78369 228 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 BFSP1Q12934 665 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GRIK3Q13003 919 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GRM2Q14416 872 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KCNJ12Q14500 433 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MAN2A1Q16706 1144 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SOWAHCQ53LP3 525 aaPredicted RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 DGKKQ5KSL6 1271 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FKBP15Q5T1M5 1219 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TAS1R3Q7RTX0 852 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FAM186BQ8IYM0 893 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 LNX1Q8TBB1 728 aaPredicted RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FAXDC2Q96IV6 333 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ACAP3Q96P50 834 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 DUSP9Q99956 384 aaKnown RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PDZD7Q9H5P4 517 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MINDY3Q9H8M7 445 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RPF1Q9H9Y2 349 aaKnown RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SLC38A7Q9NVC3 462 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FANCLQ9NW38 375 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MIOSQ9NXC5 875 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 LIMA1Q9UHB6 759 aaKnown RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 R3HCC1Q9Y3T6 440 aaKnown RBP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 C2CD2Q9Y426 696 aa9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KIAA1549LQ6ZVL6 1849 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GOLGA6L6A8MZA4 724 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MICAL2O94851 1124 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TOP3BO95985 862 aaKnown RBP9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ADRB2P07550 413 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CEBPBP17676 345 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ADSSP30520 456 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GDI1P31150 447 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MTIF2P46199 727 aaKnown RBP9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KCNA1Q09470 495 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ELAVL2Q12926 359 aaKnown RBP9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RAB33AQ14088 237 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NCAPHQ15003 741 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PSMD6Q15008 389 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SH3PXD2AQ5TCZ1 1133 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 Q6ZS52 159 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 WDR49Q8IV35 697 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 BRSK2Q8IWQ3 736 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SYNPOQ8N3V7 929 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CCDC150Q8NCX0 1101 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GLIS3Q8NEA6 775 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ZC3H10Q96K80 434 aaKnown RBP9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CNOT6LQ96LI5 555 aaKnown RBP9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TUBGCP2Q9BSJ2 902 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FGFBP2Q9BYJ0 223 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 DNAI2Q9GZS0 605 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CDT1Q9H211 546 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 POLD4Q9HCU8 107 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms