RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.91■■□□□ 1.42
CCDC47-204ENST00000582252 PIN4Q9Y237 131 aaKnown RBP23.91■■□□□ 1.42
CCDC47-204ENST00000582252 PLAAQ9Y263 795 aa23.91■■□□□ 1.42
CCDC47-204ENST00000582252 SNX24Q9Y343 169 aa23.91■■□□□ 1.42
CCDC47-204ENST00000582252 TRIP11Q15643 1979 aa23.91■■□□□ 1.42
CCDC47-204ENST00000582252 KBTBD13C9JR72 458 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 GJB6O95452 261 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 GAS8O95995 478 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 CD4P01730 458 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 RPLP2P05387 115 aaKnown RBP23.9■■□□□ 1.42
CCDC47-204ENST00000582252 NDST1P52848 882 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 GYS2P54840 703 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 ZNF200P98182 395 aaPredicted RBP23.9■■□□□ 1.42
CCDC47-204ENST00000582252 ZFYVE27Q5T4F4 411 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 FBXO46Q6PJ61 603 aaPredicted RBP23.9■■□□□ 1.42
CCDC47-204ENST00000582252 ZBTB9Q96C00 473 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 O00370 1275 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 RALAP11233 206 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 GJC1P36383 396 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 GABRB2P47870 512 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 ZBTB6Q15916 424 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 GDF6Q6KF10 455 aaPredicted RBP23.9■■□□□ 1.42
CCDC47-204ENST00000582252 UBLCP1Q8WVY7 318 aaPredicted RBP23.9■■□□□ 1.42
CCDC47-204ENST00000582252 PIK3R5Q8WYR1 880 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 DCLK3Q9C098 648 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 ZDHHC18Q9NUE0 388 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 HMGXB4Q9UGU5 601 aa23.9■■□□□ 1.42
CCDC47-204ENST00000582252 GOLGA8SH3BPF8 625 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 PPFIA2O75334 1257 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 RECQL4O94761 1208 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 KRT1P04264 644 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 CCL5P13501 91 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 PSMA2P25787 234 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 DHX9Q08211 1270 aaKnown RBP23.89■■□□□ 1.41
CCDC47-204ENST00000582252 CALCOCO2Q13137 446 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 KLF1Q13351 362 aaPredicted RBP23.89■■□□□ 1.41
CCDC47-204ENST00000582252 ITGA7Q13683 1181 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 ACAP1Q15027 740 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 MTFR1Q15390 333 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 PKN2Q16513 984 aaKnown RBP23.89■■□□□ 1.41
CCDC47-204ENST00000582252 CCNG2Q16589 344 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 HADHQ16836 314 aaKnown RBP23.89■■□□□ 1.41
CCDC47-204ENST00000582252 LCLAT1Q6UWP7 414 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 ALKAL1Q6UXT8 129 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 POLNQ7Z5Q5 900 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 ATL2Q8NHH9 583 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 C1orf54Q8WWF1 131 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 ZNF560Q96MR9 790 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 RNF208Q9H0X6 261 aa23.89■■□□□ 1.41
CCDC47-204ENST00000582252 GRIN2DO15399 1336 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 M0QZ92 97 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 HSPA1AP0DMV8 641 aaKnown RBP23.88■■□□□ 1.41
CCDC47-204ENST00000582252 HSPA1BP0DMV9 641 aaKnown RBP23.88■■□□□ 1.41
CCDC47-204ENST00000582252 PTPN7P35236 360 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 LBX1P52954 281 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 PLTPP55058 493 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 LMNB2Q03252 620 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 ZNF252P-AS1Q0IIN9 211 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 NFX1Q12986 1120 aaKnown RBP23.88■■□□□ 1.41
CCDC47-204ENST00000582252 PDCLQ13371 301 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 ORC1Q13415 861 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 XYLT1Q86Y38 959 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 DEFB118Q96PH6 123 aa23.88■■□□□ 1.41
CCDC47-204ENST00000582252 DNM1LO00429 736 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 TJP3O95049 919 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 KRT7P08729 469 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 PNPLA4P41247 253 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 RPL21P46778 160 aaKnown RBP23.87■■□□□ 1.41
CCDC47-204ENST00000582252 LMAN1P49257 510 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 SNX16P57768 344 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 KRT17Q04695 432 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 DAB2IPQ5VWQ8 1189 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 RSPH3Q86UC2 560 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 UNC93AQ86WB7 457 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 ZMAT2Q96NC0 199 aaKnown RBP23.87■■□□□ 1.41
CCDC47-204ENST00000582252 CPXM1Q96SM3 734 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 NXF3Q9H4D5 531 aaKnown RBP23.87■■□□□ 1.41
CCDC47-204ENST00000582252 GRHL1Q9NZI5 618 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 WHRNQ9P202 907 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 PHF24Q9UPV7 400 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 SNX9Q9Y5X1 595 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 A0A1W2PQ45 241 aaPredicted RBP23.87■■□□□ 1.41
CCDC47-204ENST00000582252 A0A1W2PQY0 241 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 GPD2P43304 727 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 KCNJ1P48048 391 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 EIF3BP55884 814 aaKnown RBP23.87■■□□□ 1.41
CCDC47-204ENST00000582252 PTK6Q13882 451 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 SERINC5Q86VE9 423 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 MCRS1Q96EZ8 462 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 SLITRK1Q96PX8 696 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 CYTH4Q9UIA0 394 aa23.87■■□□□ 1.41
CCDC47-204ENST00000582252 F8VP50 259 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 SETSIPP0DME0 302 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 OGDHQ02218 1023 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 SLMAPQ14BN4 828 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 C9orf57Q5W0N0 161 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 ZDHHC24Q6UX98 284 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 TMEM130Q8N3G9 435 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 CCDC114Q96M63 670 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 APOL6Q9BWW8 343 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms