RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 LMCD1Q9NZU5 365 aa12.22□□□□□ -0.45
GGA3-211ENST00000582232 ARHGAP20Q9P2F6 1191 aa12.22□□□□□ -0.45
GGA3-211ENST00000582232 AFF4Q9UHB7 1163 aaKnown RBP12.22□□□□□ -0.45
GGA3-211ENST00000582232 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.22□□□□□ -0.45
GGA3-211ENST00000582232 MYH10P35580 1976 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.45
GGA3-211ENST00000582232 SSU72P8A0A1W2PR75 194 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 WDR27A2RRH5 827 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 HIDE1A8MVS5 230 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 ADAM12O43184 909 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 THAP12O43422 761 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 VNN2O95498 520 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 ADH1AP07327 375 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 CPB1P15086 417 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 ATF2P15336 505 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 CD19P15391 556 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 CHRNB2P17787 502 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 RPL17P18621 184 aaKnown RBP12.21□□□□□ -0.45
GGA3-211ENST00000582232 POU3F3P20264 500 aaPredicted RBP12.21□□□□□ -0.45
GGA3-211ENST00000582232 BRD2P25440 801 aaKnown RBP12.21□□□□□ -0.45
GGA3-211ENST00000582232 IRS1P35568 1242 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 MAGEA11P43364 429 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 ARID5AQ03989 594 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 PTPROQ16827 1216 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 SLC39A12Q504Y0 691 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 PKDCCQ504Y2 493 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 PLPP4Q5VZY2 271 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 LILRA6Q6PI73 481 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 ZNF571Q7Z3V5 609 aaPredicted RBP12.21□□□□□ -0.45
GGA3-211ENST00000582232 ANKRD52Q8NB46 1076 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 OLIG1Q8TAK6 271 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 SPPL2BQ8TCT7 592 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 SLC2A14Q8TDB8 520 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 GDPD5Q8WTR4 605 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 MYLPFQ96A32 169 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 AGPAT1Q99943 283 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 LPIN3Q9BQK8 851 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 LHX5Q9H2C1 402 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 TTYH1Q9H313 450 aaPredicted RBP12.21□□□□□ -0.45
GGA3-211ENST00000582232 TMLHEQ9NVH6 421 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 TSPAN16Q9UKR8 245 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 PCDHB5Q9Y5E4 795 aa12.21□□□□□ -0.45
GGA3-211ENST00000582232 ATP8B3O60423 1300 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 MTMR11A4FU01 709 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
GGA3-211ENST00000582232 LSM8O95777 96 aaKnown RBP12.2□□□□□ -0.46
GGA3-211ENST00000582232 CALCAP01258 141 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 OR4Q2P0C623 313 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 SKILP12757 684 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 CCDC130P13994 396 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 CDH5P33151 784 aaPredicted RBP12.2□□□□□ -0.46
GGA3-211ENST00000582232 FMO1Q01740 532 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 CCDC142Q17RM4 750 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 ASTE1Q2TB18 679 aaPredicted RBP12.2□□□□□ -0.46
GGA3-211ENST00000582232 VSTM1Q6UX27 236 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 CYP26C1Q6V0L0 522 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 TRIM72Q6ZMU5 477 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 RTL10Q7L3V2 364 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 FAM35AQ86V20 835 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 TMTC1Q8IUR5 882 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
GGA3-211ENST00000582232 TMEM139Q8IV31 216 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 LRRC8AQ8IWT6 810 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 TCEAL8Q8IYN2 117 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 SLC30A5Q8TAD4 765 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 MICAL1Q8TDZ2 1067 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 SLC20A1Q8WUM9 679 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 CHP1Q99653 195 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 DUSP16Q9BY84 665 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 UBXN6Q9BZV1 441 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 ZNF518BQ9C0D4 1074 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 CSNK1G1Q9HCP0 422 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 FAM49BQ9NUQ9 324 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 HESX1Q9UBX0 185 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 PLXNA3P51805 1871 aa12.2□□□□□ -0.46
GGA3-211ENST00000582232 PATJQ8NI35 1801 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 RFXAPO00287 272 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 MICAL2O94851 1124 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 CYP1A1P04798 512 aaPredicted RBP12.19□□□□□ -0.46
GGA3-211ENST00000582232 MMEP08473 750 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 SETSIPP0DME0 302 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 GZMAP12544 262 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 NPR3P17342 541 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 KLRC2P26717 231 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 GPD2P43304 727 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 CLCN4P51793 760 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 BCAT1P54687 386 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 CYP27A1Q02318 531 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 BST2Q10589 180 aaKnown RBP12.19□□□□□ -0.46
GGA3-211ENST00000582232 TDRD12Q587J7 1177 aaKnown RBP12.19□□□□□ -0.46
GGA3-211ENST00000582232 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 TTC30AQ86WT1 665 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 HDAC7Q8WUI4 952 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 CEP295NLQ96MC4 621 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms