RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 KALRNO60229 2985 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 CLTAP09496 248 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 TNFSF9P41273 254 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 MATR3P43243 847 aaKnown RBP eCLIP13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 FOSBP53539 338 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 PPP2R3AQ06190 1150 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 MCL1Q07820 350 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 STRN3Q13033 797 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 USP4Q13107 963 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 NR1H3Q13133 447 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 MAPK7Q13164 816 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 TRIP6Q15654 476 aaKnown RBP13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 PEAR1Q5VY43 1037 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 CCNI2Q6ZMN8 369 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 LRRTM3Q86VH5 581 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 HAPLN2Q9GZV7 340 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 TRPC7Q9HCX4 862 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 BCCIPQ9P287 314 aaKnown RBP eCLIP13.6□□□□□ -0.238e-7■■□□□ 14.4
CSNK1D-218ENST00000581655 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 SHROOM3Q8TF72 1996 aa13.6□□□□□ -0.23
CSNK1D-218ENST00000581655 LACTBL1A8MY62 500 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 CLDN3O15551 220 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 SH3BP5O60239 455 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 TADA3O75528 432 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 CYP11A1P05108 521 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 SERPINF2P08697 491 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 OR52Z1P0C646 297 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 FTH1P19P0C7X4 201 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 FDPSP14324 419 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 HOXD12P35452 270 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 OPRD1P41143 372 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 GPR15P49685 360 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 MAP7D1Q3KQU3 841 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 SPDYCQ5MJ68 293 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 ALLCQ8N6M5 410 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 TXNDC5Q8NBS9 432 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 CEP76Q8TAP6 659 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 C2orf15Q8WU43 125 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 SLC22A12Q96S37 553 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 CYP2S1Q96SQ9 504 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 LINC00597Q9H2U6 94 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 CAPN10Q9HC96 672 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 SCUBE2Q9NQ36 999 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 PDRG1Q9NUG6 133 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 DDX19AQ9NUU7 478 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 PTPRBP23467 1997 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 MYH11P35749 1972 aa13.59□□□□□ -0.23
CSNK1D-218ENST00000581655 TCHHQ07283 1943 aa13.58□□□□□ -0.23
CSNK1D-218ENST00000581655 ANAPC1Q9H1A4 1944 aa13.58□□□□□ -0.23
CSNK1D-218ENST00000581655 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 SGK1O00141 431 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 PFKFB2O60825 505 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 KLF8O95600 359 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 PRB1P04280 392 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 CKMP06732 381 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 CSH1P0DML2 217 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 CSH2P0DML3 217 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 MRPS21P82921 87 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 C19orf57Q0VDD7 668 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 SMARCB1Q12824 385 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 SPATA1Q5VX52 437 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 ZPBP2Q6X784 338 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 SFTPA1Q8IWL2 248 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 DEFB119Q8N690 84 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 SH3RF2Q8TEC5 729 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 HMGB4Q8WW32 186 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 RUSC1Q9BVN2 902 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 TM6SF1Q9BZW5 370 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 TMEM206Q9H813 350 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 POLMQ9NP87 494 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 PCDHB9Q9Y5E1 797 aa13.58□□□□□ -0.24
CSNK1D-218ENST00000581655 MYOFQ9NZM1 2061 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 TRAV19A0A0A6YYK7 116 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 E9PMD0 336 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 ARHGAP33O14559 1287 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 AP5Z1O43299 807 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 REC8O95072 547 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 NFATC1O95644 943 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 TIE1P35590 1138 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 BYSLQ13895 437 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 GAB4Q2WGN9 574 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 ZC2HC1CQ53FD0 456 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 METTL23Q86XA0 190 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 THEM5Q8N1Q8 247 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 PGBD3Q8N328 593 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 IL17RCQ8NAC3 791 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 CRELD1Q96HD1 420 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 DNAAF2Q9NVR5 837 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 DSEQ9UL01 958 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
CSNK1D-218ENST00000581655 PRPF40AO75400 957 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-218ENST00000581655 PAX3P23760 479 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms