RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 PPM1EQ8WY54 764 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 PCMTD1Q96MG8 357 aaPredicted RBP16.06■□□□□ 0.16
MKS1-210ENST00000581180 TTYH3Q9C0H2 523 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 CYP4F11Q9HBI6 524 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 DZANK1Q9NVP4 752 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 ABI2Q9NYB9 513 aaPredicted RBP16.06■□□□□ 0.16
MKS1-210ENST00000581180 CEP72Q9P209 647 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 DPP7Q9UHL4 492 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 PRUNE2Q8WUY3 3088 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 CLDN5O00501 218 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 CBFA2T2O43439 604 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 SRGAP2BP0DMP2 458 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 CYP2F1P24903 491 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 HOXA9P31269 272 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 ELF1P32519 619 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 MAGEA11P43364 429 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 RAPGEF1Q13905 1077 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 LIN9Q5TKA1 542 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 ARHGAP17Q68EM7 881 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 CCDC149Q6ZUS6 474 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 SPATA2LQ8IUW3 424 aaPredicted RBP16.05■□□□□ 0.16
MKS1-210ENST00000581180 FAM71AQ8IYT1 594 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 FEZF2Q8TBJ5 459 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 MSLNLQ96KJ4 702 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 HEXIM2Q96MH2 286 aaKnown RBP16.05■□□□□ 0.16
MKS1-210ENST00000581180 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
MKS1-210ENST00000581180 ZSWIM1Q9BR11 485 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 RHOBTB2Q9BYZ6 727 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 ZNF518BQ9C0D4 1074 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 NLRC4Q9NPP4 1024 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 SLC27A5Q9Y2P5 690 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 INSL5Q9Y5Q6 135 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 DOCK8Q8NF50 2099 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 OBSL1O75147 1896 aa16.05■□□□□ 0.16
MKS1-210ENST00000581180 ANAPC1Q9H1A4 1944 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 DENND4AQ7Z401 1863 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 F8VZ95 297 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 PRRG1O14668 218 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 RFPL2O75678 378 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 TPM3P06753 285 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 PNMA6AP0CW24 399 aaPredicted RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 VDRP11473 427 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 KRT5P13647 590 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 CCDC130P13994 396 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 HOXB8P17481 243 aaPredicted RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 TRIM21P19474 475 aaKnown RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 BDNFP23560 247 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 TUFMP49411 452 aaKnown RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 CYP27A1Q02318 531 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 FIGNQ5HY92 759 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 PPP1R26Q5T8A7 1209 aaPredicted RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 FAM35AQ86V20 835 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 C12orf76Q8N812 135 aaPredicted RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 CMASQ8NFW8 434 aaPredicted RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 SLC2A14Q8TDB8 520 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 TFAP2BQ92481 460 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 CYFIP2Q96F07 1278 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 DNAI2Q9GZS0 605 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 S1PR5Q9H228 398 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 UBE2ZQ9H832 354 aaPredicted RBP16.04■□□□□ 0.16
MKS1-210ENST00000581180 SFXN1Q9H9B4 322 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 ZDHHC7Q9NXF8 308 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 KIAA1257Q9ULG3 409 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 YIPF1Q9Y548 306 aa16.04■□□□□ 0.16
MKS1-210ENST00000581180 SOAT2O75908 522 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 CALCAP01258 141 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 POU2F2P09086 479 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 HNRNPA1P09651 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
MKS1-210ENST00000581180 CLCN1P35523 988 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 CACNA2D1P54289 1103 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 MGAT5BQ3V5L5 792 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 PPM1LQ5SGD2 360 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 ELMSAN1Q6PJG2 1045 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 BAP1Q92560 729 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
MKS1-210ENST00000581180 NUP58Q9BVL2 599 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 PRKD2Q9BZL6 878 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 EDEM3Q9BZQ6 932 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 ACP6Q9NPH0 428 aa16.03■□□□□ 0.16
MKS1-210ENST00000581180 COL6A3P12111 3177 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 CCDC195A0A1B0GUA6 201 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 O00370 1275 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 CYP26A1O43174 497 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 CD19P15391 556 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 ATF6P18850 670 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 USP8P40818 1118 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 GPR15P49685 360 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 PLCB2Q00722 1185 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 TWF1Q12792 350 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 SKIV2LQ15477 1246 aaKnown RBP16.02■□□□□ 0.16
MKS1-210ENST00000581180 SGO2Q562F6 1265 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 EP400NLQ6ZTU2 488 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 VSTM4Q8IW00 320 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 ZMIZ2Q8NF64 920 aa16.02■□□□□ 0.16
MKS1-210ENST00000581180 HLA-CQ95604 372 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms