RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 LAMC3Q9Y6N6 1575 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 COL4A3Q01955 1670 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 PDS5BQ9NTI5 1447 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 TRIM43BA6NCK2 446 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 hCG_1984214I3L0E3 225 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 ESRRBO95718 433 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 INHBCP55103 352 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 WNT3P56703 355 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 RPS16P62249 146 aaKnown RBP5.4□□□□□ -1.54
NF1-220ENST00000581113 ITIH3Q06033 890 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 FOXI1Q12951 378 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 MGAT5BQ3V5L5 792 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 ARHGAP40Q5TG30 622 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 MICU3Q86XE3 530 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 ZNF280BQ86YH2 543 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 PJA1Q8NG27 643 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 TRIM43Q96BQ3 446 aaPredicted RBP5.4□□□□□ -1.54
NF1-220ENST00000581113 FAM136AQ96C01 138 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 NMD3Q96D46 503 aaKnown RBP5.4□□□□□ -1.54
NF1-220ENST00000581113 PTDSS2Q9BVG9 487 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 STK31Q9BXU1 1019 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 ZSCAN32Q9NX65 697 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 COL20A1Q9P218 1284 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 SERTAD3Q9UJW9 196 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 PACSIN3Q9UKS6 424 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 TBC1D30Q9Y2I9 924 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 MRPS17Q9Y2R5 130 aaKnown RBP5.4□□□□□ -1.54
NF1-220ENST00000581113 PAXBP1Q9Y5B6 917 aa5.4□□□□□ -1.54
NF1-220ENST00000581113 RHPN2P1A8MT19 583 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PYCARD-AS1I3L0S3 204 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PMM2O15305 246 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 RASSF9O75901 435 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 GCP02774 474 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 MYL1P05976 194 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 RHOP08100 348 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 CHRM2P08172 466 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 NBPF7P0C2Y1 421 aaPredicted RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 PLA2G5P39877 138 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 MPLP40238 635 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 FOLR3P41439 243 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 DPTQ07507 201 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PLA1AQ53H76 456 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 ICE2Q659A1 982 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 SFRP4Q6FHJ7 346 aaPredicted RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 RGS7BPQ6MZT1 257 aaPredicted RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 NOL8Q76FK4 1167 aaKnown RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 KRT78Q8N1N4 520 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 OR56A3Q8NH54 315 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 TFAP2BQ92481 460 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 SORCS2Q96PQ0 1159 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 MESP1Q9BRJ9 268 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 AMBRA1Q9C0C7 1298 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 BTBD1Q9H0C5 482 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 TOR3AQ9H497 397 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 LRIT1Q9P2V4 623 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 WIZO95785 1651 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PPM1DO15297 605 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PROM1O43490 865 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PDHA1P08559 390 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 MYL3P08590 195 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 RPL17P18621 184 aaKnown RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 LRPAP1P30533 357 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 TGFB2P61812 414 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 MRPS35P82673 323 aaKnown RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 EIF2B5Q13144 721 aaKnown RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 KAZNQ674X7 775 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 PHKBQ93100 1093 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 SPSB4Q96A44 273 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 NELL2Q99435 816 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 ARNT2Q9HBZ2 717 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 HDAC9Q9UKV0 1011 aa5.39□□□□□ -1.55
NF1-220ENST00000581113 NDRG4Q9ULP0 352 aaKnown RBP5.39□□□□□ -1.55
NF1-220ENST00000581113 RSF1Q96T23 1441 aaPredicted RBP5.38□□□□□ -1.55
NF1-220ENST00000581113 SALL3Q9BXA9 1300 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 A0A087X1B8 175 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 MBD3L4A6NDZ8 208 aaPredicted RBP5.38□□□□□ -1.55
NF1-220ENST00000581113 MBD3L3A6NE82 208 aaPredicted RBP5.38□□□□□ -1.55
NF1-220ENST00000581113 RHOBTB3O94955 611 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 SLC5A1P13866 664 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 PHKG2P15735 406 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 KLRC1P26715 233 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 PPIFP30405 207 aaKnown RBP5.38□□□□□ -1.55
NF1-220ENST00000581113 ADRA1BP35368 520 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 PIK3CBP42338 1070 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 NXPH1P58417 271 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 MYO1EQ12965 1108 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 E2F2Q14209 437 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 CCSAPQ6IQ19 270 aaPredicted RBP5.38□□□□□ -1.55
NF1-220ENST00000581113 ZDHHC24Q6UX98 284 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 GAS2L3Q86XJ1 694 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 FAM109AQ8N4B1 249 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 ACTRT2Q8TDY3 377 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 FKBP10Q96AY3 582 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 MRIQ9BWK5 157 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 IKZF4Q9H2S9 585 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 PNPLA8Q9NP80 782 aa5.38□□□□□ -1.55
NF1-220ENST00000581113 THOC2Q8NI27 1593 aaKnown RBP5.37□□□□□ -1.55
NF1-220ENST00000581113 VWC2LB2RUY7 222 aa5.37□□□□□ -1.55
NF1-220ENST00000581113 F8W8V4 182 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms