RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 RIN2Q8WYP3 895 aaPredicted RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 TATDN2Q93075 761 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 MMS19Q96T76 1030 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 NAA15Q9BXJ9 866 aaKnown RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 EDEM3Q9BZQ6 932 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 TRIM5Q9C035 493 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 GANQ9H2C0 597 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 SMYD3Q9H7B4 428 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 AP5Z1O43299 807 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 NARSO43776 548 aaKnown RBP12.94□□□□□ -0.34
CCDC84-209ENST00000580556 TBC1D4O60343 1298 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 LILRB3O75022 631 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 MFAP3P55082 362 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 LRMPQ12912 555 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 SMC1AQ14683 1233 aaKnown RBP12.94□□□□□ -0.34
CCDC84-209ENST00000580556 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 WSCD1Q658N2 575 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 OVOS1Q6IE37 1185 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 ZNF280DQ6N043 979 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 TMC5Q6UXY8 1006 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 SCARA5Q6ZMJ2 495 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 TAS1R1Q7RTX1 841 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 VSTM4Q8IW00 320 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 KREMEN1Q96MU8 473 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 ARID3AQ99856 593 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 NUP58Q9BVL2 599 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 TTYH3Q9C0H2 523 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 GRPEL1Q9HAV7 217 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 UBE2TQ9NPD8 197 aaPredicted RBP12.94□□□□□ -0.34
CCDC84-209ENST00000580556 CISHQ9NSE2 258 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 FAM207AQ9NSI2 230 aaPredicted RBP12.94□□□□□ -0.34
CCDC84-209ENST00000580556 CEP72Q9P209 647 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 MTRRQ9UBK8 725 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 MYO6Q9UM54 1294 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 CNTN6Q9UQ52 1028 aa12.94□□□□□ -0.34
CCDC84-209ENST00000580556 OR6C75A6NL08 312 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 CILPO75339 1184 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 CXCL14O95715 111 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 TRIM21P19474 475 aaKnown RBP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 ACO1P21399 889 aaKnown RBP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 PCSK1P29120 753 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 KLK7P49862 253 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 ZNF75DP51815 510 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 TRIM14Q14142 442 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 PUM1Q14671 1186 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 IQCEQ6IPM2 695 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 SLC8B1Q6J4K2 584 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 RRAGAQ7L523 313 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 CEP57Q86XR8 500 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 THEM5Q8N1Q8 247 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 LNX1Q8TBB1 728 aaPredicted RBP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 SHC3Q92529 594 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 ELMO3Q96BJ8 720 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 PCMTD1Q96MG8 357 aaPredicted RBP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 ACBD6Q9BR61 282 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 STK33Q9BYT3 514 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 SDCBP2Q9H190 292 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 RXFP1Q9HBX9 757 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 MRPL17Q9NRX2 175 aaKnown RBP12.93□□□□□ -0.34
CCDC84-209ENST00000580556 FNIP2Q9P278 1114 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 DNAJC12Q9UKB3 198 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 USTQ9Y2C2 406 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 FHOD1Q9Y613 1164 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 VWA8A3KMH1 1905 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 FRYLO94915 3013 aa12.93□□□□□ -0.34
CCDC84-209ENST00000580556 KMT2BQ9UMN6 2715 aaPredicted RBP12.92□□□□□ -0.34
CCDC84-209ENST00000580556 A0A1W2PQJ5 194 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 KRBA1A5PL33 1030 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 EPHB6O15197 1021 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 C1RP00736 705 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 CDC25BP30305 580 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 GNL1P36915 607 aaPredicted RBP12.92□□□□□ -0.34
CCDC84-209ENST00000580556 RAP1GAPP47736 663 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 ZNF132P52740 706 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 CDH8P55286 799 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 JAM2P57087 298 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 POLR2FP61218 127 aaKnown RBP12.92□□□□□ -0.34
CCDC84-209ENST00000580556 APBA1Q02410 837 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 TDGQ13569 410 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 GSE1Q14687 1217 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 PSMD5Q16401 504 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 RSAD2Q8WXG1 361 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 KAT5Q92993 513 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 HINFPQ9BQA5 517 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms