RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 PEAR1Q5VY43 1037 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-213ENST00000579605 PHLPP2Q6ZVD8 1323 aa14.28□□□□□ -0.12
CDK5RAP3-213ENST00000579605 TAS1R3Q7RTX0 852 aa14.28□□□□□ -0.12
CDK5RAP3-213ENST00000579605 MTMR9Q96QG7 549 aa14.28□□□□□ -0.12
CDK5RAP3-213ENST00000579605 HSFX1Q9UBD0 423 aa14.28□□□□□ -0.12
CDK5RAP3-213ENST00000579605 EPB41L2O43491 1005 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 CKMP06732 381 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 HAPLN1P10915 354 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PROZP22891 400 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 HOXD12P35452 270 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 KRT2P35908 639 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 MRPS21P82921 87 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 FAM160A1Q05DH4 1040 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ZNF33AQ06730 810 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ZNF268Q14587 947 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ZNF77Q15935 545 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 LRRTM3Q86VH5 581 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SETD7Q8WTS6 366 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SLC22A12Q96S37 553 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ZCWPW1Q9H0M4 648 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TMEM60Q9H2L4 133 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 BHMT2Q9H2M3 363 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TMEM134Q9H6X4 195 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 KMT5AQ9NQR1 393 aa14.27□□□□□ -0.13
CDK5RAP3-213ENST00000579605 A0A087WV48 116 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TK2O00142 265 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ABCG1P45844 678 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SLC6A11P48066 632 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 LILRA4P59901 499 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SLC14A1Q13336 389 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PLEKHG6Q3KR16 790 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ZC2HC1CQ53FD0 456 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ZNF843Q8N446 348 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 IL17RCQ8NAC3 791 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SH3RF2Q8TEC5 729 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TM6SF1Q9BZW5 370 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PDRG1Q9NUG6 133 aa14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 UBQLN1Q9UMX0 589 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TRAV19A0A0A6YYK7 116 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 LACTBL1A8MY62 500 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ATXN7O15265 892 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SLC16A4O15374 487 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PRPF40AO75400 957 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 NFATC1O95644 943 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 USP17L7P0C7H9 530 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 RPA1P27694 616 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ITPKBP27987 946 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 MESP2Q0VG99 397 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 NOLC1Q14978 699 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 EOGTQ5NDL2 527 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TMPRSS7Q7RTY8 843 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 RABEPKQ7Z6M1 372 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 METTL23Q86XA0 190 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 THEM5Q8N1Q8 247 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ARL14EPQ8N8R7 260 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ERMNQ8TAM6 284 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SPPL2BQ8TCT7 592 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ERLEC1Q96DZ1 483 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 DRC1Q96MC2 740 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PI4K2AQ9BTU6 479 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 APC2O95996 2303 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 URB1O60287 2271 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 GON4LQ3T8J9 2241 aa14.25□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ADAMTS9Q9P2N4 1935 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 FAM149AA5PLN7 773 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 MYMKA6NI61 221 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SFI1A8K8P3 1242 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 J3QKU1 62 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TOM1L1O75674 476 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 GJB3O75712 270 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 CDKL5O76039 1030 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 CSH1P0DML2 217 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 CSH2P0DML3 217 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 CYP3A5P20815 502 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 MCM7P33993 719 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TNFSF9P41273 254 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 FOSBP53539 338 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 STRN3Q13033 797 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 USP4Q13107 963 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ZBTB6Q15916 424 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ECM1Q16610 540 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 DDR2Q16832 855 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SLC36A4Q6YBV0 504 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SLC41A1Q8IVJ1 513 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TRIML1Q8N9V2 468 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 LRRC15Q8TF66 581 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TNFRSF25Q93038 417 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 HSPA12BQ96MM6 686 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PLEKHA5Q9HAU0 1116 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 BRMS1Q9HCU9 246 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 DKK4Q9UBT3 224 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 PCOLCE2Q9UKZ9 415 aa14.24□□□□□ -0.13
CDK5RAP3-213ENST00000579605 ACACAQ13085 2346 aa14.23□□□□□ -0.13
CDK5RAP3-213ENST00000579605 TTC26A0AVF1 554 aa14.23□□□□□ -0.13
CDK5RAP3-213ENST00000579605 SCAMP3O14828 347 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-213ENST00000579605 CLDN3O15551 220 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms