RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 PRSS33Q8NF86 280 aa25.54■■□□□ 1.68
LIMD2-207ENST00000579329 SHKBP1Q8TBC3 707 aa25.54■■□□□ 1.68
LIMD2-207ENST00000579329 MYCBPAPQ8TBZ2 947 aa25.54■■□□□ 1.68
LIMD2-207ENST00000579329 GIPC2Q8TF65 315 aa25.54■■□□□ 1.68
LIMD2-207ENST00000579329 DUSP9Q99956 384 aaKnown RBP25.54■■□□□ 1.68
LIMD2-207ENST00000579329 NUP62CLQ9H1M0 184 aa25.54■■□□□ 1.68
LIMD2-207ENST00000579329 ZNF334Q9HCZ1 680 aaPredicted RBP25.54■■□□□ 1.68
LIMD2-207ENST00000579329 GOLGA6L22H0YM25 854 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 GPR15P49685 360 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 CDH8P55286 799 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 MDH1BQ5I0G3 518 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 SLC44A3Q8N4M1 653 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 FGF14Q92915 247 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 SDCBP2Q9H190 292 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 USP34Q70CQ2 3546 aa25.53■■□□□ 1.68
LIMD2-207ENST00000579329 GJA1P17302 382 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 PTPN1P18031 435 aaKnown RBP25.52■■□□□ 1.68
LIMD2-207ENST00000579329 ASPAP45381 313 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 STX17P56962 302 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 CYP27A1Q02318 531 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 TEAD2Q15562 447 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 CCDC40Q4G0X9 1142 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 VSTM1Q6UX27 236 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 FRMD5Q7Z6J6 570 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 B3GALNT2Q8NCR0 500 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 FBXL13Q8NEE6 735 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 PCED1BQ96HM7 432 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 GPR88Q9GZN0 384 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 NIF3L1Q9GZT8 377 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 DPEP3Q9H4B8 488 aa25.52■■□□□ 1.68
LIMD2-207ENST00000579329 A0A1W2PRU2 124 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 NRG2O14511 850 aaPredicted RBP25.51■■□□□ 1.67
LIMD2-207ENST00000579329 CSH1P0DML2 217 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 CSH2P0DML3 217 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 GABRR2P28476 465 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 CDC25CP30307 473 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 DDR2Q16832 855 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 IER5LQ5T953 404 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 BMP8AQ7Z5Y6 402 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 SCN4BQ8IWT1 228 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 ST13P5Q8NFI4 369 aaPredicted RBP25.51■■□□□ 1.67
LIMD2-207ENST00000579329 GPR152Q8TDT2 470 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 ASIC4Q96FT7 647 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 TNIP3Q96KP6 325 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 GCNAQ96QF7 691 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 BCO2Q9BYV7 579 aa25.51■■□□□ 1.67
LIMD2-207ENST00000579329 APOBEC3GQ9HC16 384 aaKnown RBP25.51■■□□□ 1.67
LIMD2-207ENST00000579329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.51■■□□□ 1.67
LIMD2-207ENST00000579329 NARSO43776 548 aaKnown RBP25.5■■□□□ 1.67
LIMD2-207ENST00000579329 BDNFP23560 247 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 SDHAF4Q5VUM1 108 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 POTEHQ6S545 545 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 GAREM2Q75VX8 874 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 SLC35C1Q96A29 364 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 PBXIP1Q96AQ6 731 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 KXD1Q9BQD3 176 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 ATXN3LQ9H3M9 355 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 SLITRK6Q9H5Y7 841 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 CYP3A43Q9HB55 503 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 RAB20Q9NX57 234 aa25.5■■□□□ 1.67
LIMD2-207ENST00000579329 ECI2O75521 394 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 GNA14O95837 355 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 SRFP11831 508 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 HMGA1P17096 107 aaKnown RBP25.49■■□□□ 1.67
LIMD2-207ENST00000579329 CBWD6Q4V339 395 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 ARHGAP15Q53QZ3 475 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 CBWD3Q5JTY5 395 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 CBWD5Q5RIA9 395 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 UNC93AQ86WB7 457 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 MLKLQ8NB16 471 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 SEMA4DQ92854 862 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 FAXDC2Q96IV6 333 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 RPP25Q9BUL9 199 aaKnown RBP25.49■■□□□ 1.67
LIMD2-207ENST00000579329 ELOVL4Q9GZR5 314 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 IL21Q9HBE4 155 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 RWDD2AQ9UIY3 292 aa25.49■■□□□ 1.67
LIMD2-207ENST00000579329 ATP8B3O60423 1300 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 NOL4O94818 638 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 FGFR1OPO95684 399 aaKnown RBP25.48■■□□□ 1.67
LIMD2-207ENST00000579329 ANXA13P27216 316 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 WDR44Q5JSH3 913 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 FAM78AQ5JUQ0 283 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 ZSCAN18Q8TBC5 510 aaPredicted RBP25.48■■□□□ 1.67
LIMD2-207ENST00000579329 SMARCD2Q92925 531 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 ELSPBP1Q96BH3 223 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 CEP295NLQ96MC4 621 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 ASB16Q96NS5 453 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 ZFP14Q9HCL3 533 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 UXTQ9UBK9 157 aaPredicted RBP25.48■■□□□ 1.67
LIMD2-207ENST00000579329 MAGED2Q9UNF1 606 aaPredicted RBP25.48■■□□□ 1.67
LIMD2-207ENST00000579329 COQ4Q9Y3A0 265 aa25.48■■□□□ 1.67
LIMD2-207ENST00000579329 SLC38A8A6NNN8 435 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 TRIM66O15016 1216 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 LRRN2O75325 713 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 TRIM21P19474 475 aaKnown RBP25.47■■□□□ 1.67
LIMD2-207ENST00000579329 GRIK1P39086 918 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 NDST1P52848 882 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 INCA1Q0VD86 236 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 STKLD1Q8NE28 680 aa25.47■■□□□ 1.67
LIMD2-207ENST00000579329 TRMT2BQ96GJ1 504 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms