RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MYLPFQ96A32 169 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CCDC127Q96BQ5 260 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RMDN1Q96DB5 314 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SYT15Q9BQS2 421 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 IER2Q9BTL4 223 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FAM126AQ9BYI3 521 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 EPC1Q9H2F5 836 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 EBF3Q9H4W6 596 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 KIAA1586Q9HCI6 787 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SLC39A2Q9NP94 309 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 AGPAT3Q9NRZ7 376 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GKN1Q9NS71 199 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TDP1Q9NUW8 608 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 UXTQ9UBK9 157 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GMEB2Q9UKD1 530 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 USP18Q9UMW8 372 aa9.87□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CHURC1-FNTBB4DL54 471 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TGFB1I1O43294 461 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 LILRB5O75023 590 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ATP2C2O75185 946 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CKMP06732 381 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 LMO2P25791 158 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 WEE1P30291 646 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HOXD13P35453 343 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GRIK1P39086 918 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FNTBP49356 437 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MLLT6P55198 1093 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DMWDQ09019 674 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RUNX3Q13761 415 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DGKKQ5KSL6 1271 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 EPM2AIP1Q7L775 607 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DPH6Q7L8W6 267 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HS2ST1Q7LGA3 356 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TRAPPC11Q7Z392 1133 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CEP57L1Q8IYX8 460 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SPEM1Q8N4L4 309 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FSIP1Q8NA03 581 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ZNF507Q8TCN5 953 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 NUP210Q8TEM1 1887 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CGRRF1Q99675 332 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 C7orf25Q9BPX7 421 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SNX25Q9H3E2 840 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 KIF9Q9HAQ2 790 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MAGEF1Q9HAY2 307 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ABCB6Q9NP58 842 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MAGEC2Q9UBF1 373 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ZMYM5Q9UJ78 669 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PCDHA7Q9UN72 937 aa9.86□□□□□ -0.83
CDK5RAP3-211ENST00000578996 UBE4BO95155 1302 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TRAV19A0A0A6YYK7 116 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GABRDO14764 452 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 EXOC3O60645 756 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PHACTR2O75167 634 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TADA3O75528 432 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 NOL4O94818 638 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CST3P01034 146 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TDGF1P13385 188 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ARSAP15289 507 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 BDNFP23560 247 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ANXA13P27216 316 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TNNC1P63316 161 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FOXK2Q01167 660 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DNM1Q05193 864 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CYP24A1Q07973 514 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GRSF1Q12849 480 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 IFRD2Q12894 506 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SRSF5Q13243 272 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TRPC3Q13507 836 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CUL4BQ13620 913 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PKP1Q13835 747 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 KCNB1Q14721 858 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MTF1Q14872 753 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RSPO4Q2I0M5 234 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CFAP221Q4G0U5 840 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MDH1BQ5I0G3 518 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 WDR44Q5JSH3 913 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ERMP1Q7Z2K6 904 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DGLUCYQ7Z3D6 616 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MON1AQ86VX9 555 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GRAMD1CQ8IYS0 662 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ARL14EPQ8N8R7 260 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 XXYLT1Q8NBI6 393 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 OR6B3Q8NGW1 331 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SPATA18Q8TC71 538 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SCFD1Q8WVM8 642 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 KBTBD7Q8WVZ9 684 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 NELL1Q92832 810 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 TRMT2BQ96GJ1 504 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FUBP3Q96I24 572 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CYP2S1Q96SQ9 504 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PKMYT1Q99640 499 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MRPL45Q9BRJ2 306 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 HPS4Q9NQG7 708 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CFAP45Q9UL16 551 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CDH9Q9ULB4 789 aa9.85□□□□□ -0.83
CDK5RAP3-211ENST00000578996 C2orf78A6NCI8 922 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ABL1P00519 1130 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms