RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 RASGEF1CQ8N431 466 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 PDCL2Q8N4E4 241 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 APPL2Q8NEU8 664 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 OR6B3Q8NGW1 331 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-218ENST00000578469 ZFP42Q96MM3 310 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 ADAM2Q99965 735 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 RHOXF2Q9BQY4 288 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 MIS12Q9H081 205 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 SYNCQ9H7C4 482 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 WDR35Q9P2L0 1181 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 CHD9Q3L8U1 2897 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 A8MXQ7 604 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 M0QYV0 167 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 O00370 1275 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 PROSCO94903 275 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 RPL9P32969 192 aaKnown RBP17.92■□□□□ 0.46
SREBF1-218ENST00000578469 RBM10P98175 930 aaKnown RBP17.92■□□□□ 0.46
SREBF1-218ENST00000578469 SOX4Q06945 474 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-218ENST00000578469 MAMLD1Q13495 774 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 BFSP2Q13515 415 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 CCDC85BQ15834 202 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-218ENST00000578469 LCLAT1Q6UWP7 414 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 AGMOQ6ZNB7 445 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 PHLDB2Q86SQ0 1253 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 WDTC1Q8N5D0 677 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 TOP6BLQ8N6T0 577 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 BTBD6Q96KE9 485 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 PLVAPQ9BX97 442 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 PARD6BQ9BYG5 372 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 NKX2-4Q9H2Z4 354 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 RSAD1Q9HA92 442 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 EHD2Q9NZN4 543 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 IP6K2Q9UHH9 426 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 TTC7AQ9ULT0 858 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-218ENST00000578469 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.92■□□□□ 0.46
SREBF1-218ENST00000578469 BDP1A6H8Y1 2624 aa17.92■□□□□ 0.46
SREBF1-218ENST00000578469 TRIP11Q15643 1979 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 TARSL2A2RTX5 802 aaKnown RBP17.91■□□□□ 0.46
SREBF1-218ENST00000578469 ARL5CA6NH57 179 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 MGEA5O60502 916 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 H2AFXP16104 143 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-218ENST00000578469 PAX3P23760 479 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 CTNNA1P35221 906 aaKnown RBP17.91■□□□□ 0.46
SREBF1-218ENST00000578469 GNL1P36915 607 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-218ENST00000578469 SNX16P57768 344 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 LILRA4P59901 499 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 BRD3Q15059 726 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 SOWAHAQ2M3V2 549 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 GLE1Q53GS7 698 aaKnown RBP17.91■□□□□ 0.46
SREBF1-218ENST00000578469 C2CD6Q53TS8 623 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 DCUN1D2Q6PH85 259 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 FAM43BQ6ZT52 329 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-218ENST00000578469 RNF169Q8NCN4 708 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 IPO4Q8TEX9 1081 aaKnown RBP17.91■□□□□ 0.46
SREBF1-218ENST00000578469 LPPQ93052 612 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 C18orf8Q96DM3 657 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 GOLGA2P5Q9HBQ8 144 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 HESX1Q9UBX0 185 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 PCDHA3Q9Y5H8 950 aa17.91■□□□□ 0.46
SREBF1-218ENST00000578469 CCDC188H7C350 402 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 SPTLC1O15269 473 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 SETSIPP0DME0 302 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 WARSP23381 471 aaKnown RBP17.9■□□□□ 0.46
SREBF1-218ENST00000578469 MAN1A1P33908 653 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 RWDD2BP57060 319 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 RNASE9P60153 205 aaKnown RBP17.9■□□□□ 0.46
SREBF1-218ENST00000578469 ZNF268Q14587 947 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-218ENST00000578469 SEL1L2Q5TEA6 688 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 PPP2R2DQ66LE6 453 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 ACOT1Q86TX2 421 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 ECHDC2Q86YB7 292 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 C3orf20Q8ND61 904 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 RUBCNQ92622 972 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 CD101Q93033 1021 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 DDX27Q96GQ7 796 aaKnown RBP17.9■□□□□ 0.46
SREBF1-218ENST00000578469 TNIP3Q96KP6 325 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 FTHL17Q9BXU8 183 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 OSBPL7Q9BZF2 842 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 EPC1Q9H2F5 836 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 ANKZF1Q9H8Y5 726 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 SMARCAL1Q9NZC9 954 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 TSPAN16Q9UKR8 245 aa17.9■□□□□ 0.46
SREBF1-218ENST00000578469 MEIS3P2A8K0S8 358 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 PODXLO00592 558 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 CYB561D2O14569 222 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 ERLIN1O75477 346 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 SELPP16109 830 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 GPD2P43304 727 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 SCNN1GP51170 649 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 PSMC1P62191 440 aaKnown RBP17.89■□□□□ 0.45
SREBF1-218ENST00000578469 ADGRE1Q14246 886 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 LONRF2Q1L5Z9 754 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 AAK1Q2M2I8 961 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 PTPN20Q4JDL3 420 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 ARHGAP17Q68EM7 881 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 LLGL2Q6P1M3 1020 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 FBXO38Q6PIJ6 1188 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 LRRC8DQ7L1W4 858 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms