RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 YTHDC1Q96MU7 727 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CLSTN3Q9BQT9 956 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 LXNQ9BS40 222 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 RNF26Q9BY78 433 aaPredicted RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 INO80BQ9C086 356 aaPredicted RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 NRSN2Q9GZP1 204 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 PLEKHA4Q9H4M7 779 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 KCNMB3Q9NPA1 279 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 HEBP1Q9NRV9 189 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 GJB4Q9NTQ9 266 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 RGL1Q9NZL6 768 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 FNIP2Q9P278 1114 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 DNMT3BQ9UBC3 853 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ADAM28Q9UKQ2 775 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CDH7Q9ULB5 785 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 PCDHGA2Q9Y5H1 932 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ITPR1Q14643 2758 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 DSPP15924 2871 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ATG2BQ96BY7 2078 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 SDK1Q7Z5N4 2213 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 DENND4CQ5VZ89 1909 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CYP3A7-CYP3A51PA0A087WV96 503 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 I3L4J1 428 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 INO80B-WBP1J3KQ70 363 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 ERLIN2O94905 339 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 NPTXRO95502 500 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 TCF3P15923 654 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 IFNAR1P17181 557 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 GLRA2P23416 452 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CYP3A7P24462 503 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 GNA11P29992 359 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 YWHABP31946 246 aaKnown RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CCR2P41597 374 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 QARSP47897 775 aaKnown RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 USP11P51784 963 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 NLRP5P59047 1200 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PTENP60484 403 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PSMC5P62195 406 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 FANCCQ00597 558 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CYP4A11Q02928 519 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 LMNB2Q03252 620 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PRKCQQ04759 706 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 ZNF252P-AS1Q0IIN9 211 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 GRIK3Q13003 919 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PPP2R5CQ13362 524 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 DOC2BQ14184 412 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CTTNQ14247 550 aaKnown RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 HSP90AA2PQ14568 343 aaPredicted RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PSMD5Q16401 504 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 INF2Q27J81 1249 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 EARS2Q5JPH6 523 aaKnown RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PPM1JQ5JR12 505 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PPM1LQ5SGD2 360 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 FAM171A1Q5VUB5 890 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 ANKRD34AQ69YU3 496 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 NCAPH2Q6IBW4 605 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 NOTUMQ6P988 496 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PDZD3Q86UT5 571 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 FERMT3Q86UX7 667 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CEP57Q86XR8 500 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 BLIDQ8IZY5 108 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 LNX1Q8TBB1 728 aaPredicted RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CCDC12Q8WUD4 166 aaPredicted RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 HAS1Q92839 578 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CLDN23Q96B33 292 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 TCEAL4Q96EI5 215 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 DYDC2Q96IM9 177 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CEP170P1Q96L14 293 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 JAKMIP1Q96N16 626 aaKnown RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 TMEM74Q96NL1 305 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 RTKNQ9BST9 563 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PHF20Q9BVI0 1012 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 TMPRSS13Q9BYE2 586 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 AGXT2Q9BYV1 514 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 CSRNP2Q9H175 543 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 MIR1-1HGQ9H1L0 117 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 GPRC5CQ9NQ84 441 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 C2orf42Q9NWW7 574 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 ZSCAN32Q9NX65 697 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 STK39Q9UEW8 545 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 DDX25Q9UHL0 483 aaKnown RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 NDRG2Q9UN36 371 aaKnown RBP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 PCDHA4Q9UN74 947 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 KCNJ14Q9UNX9 436 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 SSX2IPQ9Y2D8 614 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 GIT1Q9Y2X7 761 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 SNX14Q9Y5W7 946 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 SF3B1O75533 1304 aaKnown RBP eCLIP4.37□□□□□ -1.71
PTPRM-206ENST00000578093 ATRXP46100 2492 aa4.37□□□□□ -1.71
PTPRM-206ENST00000578093 NUP205Q92621 2012 aa4.36□□□□□ -1.71
PTPRM-206ENST00000578093 BPTFQ12830 3046 aa4.36□□□□□ -1.71
PTPRM-206ENST00000578093 A0A087WWV3 80 aa4.36□□□□□ -1.71
PTPRM-206ENST00000578093 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.36□□□□□ -1.71
PTPRM-206ENST00000578093 SLC30A4O14863 429 aa4.36□□□□□ -1.71
PTPRM-206ENST00000578093 RECQL4O94761 1208 aa4.36□□□□□ -1.71
PTPRM-206ENST00000578093 WISP1O95388 367 aa4.36□□□□□ -1.71
PTPRM-206ENST00000578093 HNRNPA1P09651 372 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPRM-206ENST00000578093 GLB1P16278 677 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms