RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 CAPN11Q9UMQ6 739 aa13.5□□□□□ -0.25
MKS1-206ENST00000577824 PCDHB5Q9Y5E4 795 aa13.5□□□□□ -0.25
MKS1-206ENST00000577824 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.5□□□□□ -0.257e-6■■■■□ 21
MKS1-206ENST00000577824 MTCL1Q9Y4B5 1905 aaKnown RBP13.49□□□□□ -0.25
MKS1-206ENST00000577824 O00370 1275 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 HAPLN1P10915 354 aaPredicted RBP13.49□□□□□ -0.25
MKS1-206ENST00000577824 EPCAMP16422 314 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 IGFBP4P22692 258 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 GTF2F1P35269 517 aaKnown RBP eCLIP13.49□□□□□ -0.25
MKS1-206ENST00000577824 CLCN1P35523 988 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 SOX5P35711 763 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
MKS1-206ENST00000577824 ADAM15Q13444 863 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 STILQ15468 1287 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 PKDCCQ504Y2 493 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 SGO2Q562F6 1265 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 PPP1R26Q5T8A7 1209 aaPredicted RBP13.49□□□□□ -0.25
MKS1-206ENST00000577824 VSTM1Q6UX27 236 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 CCDC149Q6ZUS6 474 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 RBM23Q86U06 439 aaKnown RBP13.49□□□□□ -0.25
MKS1-206ENST00000577824 PALB2Q86YC2 1186 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 KREMEN2Q8NCW0 462 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 CMASQ8NFW8 434 aaPredicted RBP13.49□□□□□ -0.25
MKS1-206ENST00000577824 PABPC5Q96DU9 382 aaKnown RBP13.49□□□□□ -0.25
MKS1-206ENST00000577824 PGLYRP2Q96PD5 576 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 SPAG5Q96R06 1193 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 B3GNT5Q9BYG0 378 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 GRPEL1Q9HAV7 217 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 PNPLA8Q9NP80 782 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 NLRC4Q9NPP4 1024 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 MAN1C1Q9NR34 630 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.49□□□□□ -0.25
MKS1-206ENST00000577824 YIPF1Q9Y548 306 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 INSL5Q9Y5Q6 135 aa13.49□□□□□ -0.25
MKS1-206ENST00000577824 ATP8B3O60423 1300 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 GOLGA6L3A6NEY3 463 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 LRRC53A6NM62 1247 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 SEC24AO95486 1093 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 HNRNPA1P09651 372 aaKnown RBP eCLIP13.48□□□□□ -0.25
MKS1-206ENST00000577824 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
MKS1-206ENST00000577824 SRGAP2BP0DMP2 458 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 KRT5P13647 590 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 CCDC130P13994 396 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 GNA15P30679 374 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 STAT1P42224 750 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 ARPP19P56211 112 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 BPIFB4P59827 614 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 ZBED6P86452 979 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 ELMSAN1Q6PJG2 1045 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 LCLAT1Q6UWP7 414 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 CACNA2D4Q7Z3S7 1137 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
MKS1-206ENST00000577824 SPATA2LQ8IUW3 424 aaPredicted RBP13.48□□□□□ -0.25
MKS1-206ENST00000577824 TTC9BQ8N6N2 239 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 ATAD1Q8NBU5 361 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 SLC2A14Q8TDB8 520 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 EPS8L1Q8TE68 723 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 TFAP2BQ92481 460 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 SYN2Q92777 582 aaPredicted RBP13.48□□□□□ -0.25
MKS1-206ENST00000577824 CYFIP2Q96F07 1278 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 SMARCD1Q96GM5 515 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 LPIN3Q9BQK8 851 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 ZNF518BQ9C0D4 1074 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 NUCKS1Q9H1E3 243 aaKnown RBP13.48□□□□□ -0.25
MKS1-206ENST00000577824 FAM49BQ9NUQ9 324 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 ABI2Q9NYB9 513 aaPredicted RBP13.48□□□□□ -0.25
MKS1-206ENST00000577824 AIPL1Q9NZN9 384 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 NOCTQ9UK39 431 aaKnown RBP13.48□□□□□ -0.25
MKS1-206ENST00000577824 PCDHGC3Q9UN70 934 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
MKS1-206ENST00000577824 MYO7AQ13402 2215 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 TRIM66O15016 1216 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 CYP26A1O43174 497 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 TBX10O75333 385 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 ZMYND10O75800 440 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 C8AP07357 584 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 CYP11B1P15538 503 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 ATF6P18850 670 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 HNRNPH3P31942 346 aaKnown RBP13.47□□□□□ -0.25
MKS1-206ENST00000577824 PRKCIP41743 596 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 TUFMP49411 452 aaKnown RBP13.47□□□□□ -0.25
MKS1-206ENST00000577824 CACNA2D1P54289 1103 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 BCAT1P54687 386 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 PTK2Q05397 1052 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 DUSP4Q13115 394 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 CNGA2Q16280 664 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 E4F1Q66K89 784 aaPredicted RBP13.47□□□□□ -0.25
MKS1-206ENST00000577824 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 SLC47A2Q86VL8 602 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 TTC30AQ86WT1 665 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 ANKRD52Q8NB46 1076 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 SLC7A14Q8TBB6 771 aa13.47□□□□□ -0.25
MKS1-206ENST00000577824 DDX1Q92499 740 aaKnown RBP13.47□□□□□ -0.25
MKS1-206ENST00000577824 MSLNLQ96KJ4 702 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms