RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 SEC24AO95486 1093 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 SERPINC1P01008 464 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 OR4Q2P0C623 313 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 SPATA31D3P0C874 917 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 PTPN2P17706 415 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 SLC9A1P19634 815 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 ACAT1P24752 427 aaKnown RBP13.16□□□□□ -0.3
RARA-208ENST00000577646 BPIFB4P59827 614 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 UBXN1Q04323 297 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
RARA-208ENST00000577646 MEA1Q16626 185 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 SPATA31D4Q6ZUB0 917 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
RARA-208ENST00000577646 SUSD6Q92537 303 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 PCED1BQ96HM7 432 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 C8orf48Q96LL4 319 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 TMEM209Q96SK2 561 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 HNRNPABQ99729 332 aaKnown RBP13.16□□□□□ -0.3
RARA-208ENST00000577646 CRACR2AQ9BSW2 395 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 UBXN6Q9BZV1 441 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 COMMD8Q9NX08 183 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 ZMYM5Q9UJ78 669 aa13.16□□□□□ -0.3
RARA-208ENST00000577646 ZFP37Q9Y6Q3 630 aaPredicted RBP13.16□□□□□ -0.3
RARA-208ENST00000577646 TCF20Q9UGU0 1960 aaKnown RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 ZNF197O14709 1029 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 MBTPS2O43462 519 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 LRRN2O75325 713 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 VNN2O95498 520 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 VDRP11473 427 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 CD58P19256 250 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 ACO1P21399 889 aaKnown RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 RAD23BP54727 409 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 SLC8A3P57103 927 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 LRMPQ12912 555 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 KLHDC7AQ5VTJ3 777 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 ACOT1Q86TX2 421 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 WHAMMQ8TF30 809 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 SHC3Q92529 594 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 ZNF707Q96C28 371 aaPredicted RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 STK33Q9BYT3 514 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 EDEM3Q9BZQ6 932 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 PNPLA8Q9NP80 782 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 ABI2Q9NYB9 513 aaPredicted RBP13.15□□□□□ -0.3
RARA-208ENST00000577646 USTQ9Y2C2 406 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 PCDHB4Q9Y5E5 795 aa13.15□□□□□ -0.3
RARA-208ENST00000577646 CBFA2T2O43439 604 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 ATP2C2O75185 946 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CSH1P0DML2 217 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CSH2P0DML3 217 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 UCHL3P15374 230 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 ANXA13P27216 316 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 SSTR3P32745 418 aaPredicted RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 ZNF132P52740 706 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 EPHA5P54756 1037 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 PSMC1P62191 440 aaKnown RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 FANCCQ00597 558 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CYP27A1Q02318 531 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 NR1I3Q14994 352 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CLUL1Q15846 466 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CNGA2Q16280 664 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 MGAT5BQ3V5L5 792 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 SGO2Q562F6 1265 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CYP4A22Q5TCH4 519 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 RRAGAQ7L523 313 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 NEK11Q8NG66 645 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 MYLPFQ96A32 169 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 PGLYRP2Q96PD5 576 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 CSNK1G1Q9HCP0 422 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 WDR6Q9NNW5 1121 aaKnown RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
RARA-208ENST00000577646 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■□□□ 14
RARA-208ENST00000577646 UXTQ9UBK9 157 aaPredicted RBP13.14□□□□□ -0.31
RARA-208ENST00000577646 DNAJC12Q9UKB3 198 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms