RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 PES1O00541 588 aaKnown RBP21.29■■□□□ 1
SUPT4H1-202ENST00000577396 CCL16O15467 120 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 BMP1P13497 986 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 TWF1Q12792 350 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 SMAD2Q15796 467 aaKnown RBP21.29■■□□□ 1
SUPT4H1-202ENST00000577396 ZNF394Q53GI3 561 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 ATAT1Q5SQI0 421 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 C4orf50Q6ZRC1 276 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 SPATA2LQ8IUW3 424 aaPredicted RBP21.29■■□□□ 1
SUPT4H1-202ENST00000577396 SLC4A11Q8NBS3 891 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 SMG7Q92540 1137 aaKnown RBP21.29■■□□□ 1
SUPT4H1-202ENST00000577396 JAKMIP2Q96AA8 810 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 CEP72Q9P209 647 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 ATF6P18850 670 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 MAGEA11P43364 429 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 MGAT5BQ3V5L5 792 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.29■■□□□ 1
SUPT4H1-202ENST00000577396 TMEM176AQ96HP8 235 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 CNTN6Q9UQ52 1028 aa21.29■■□□□ 1
SUPT4H1-202ENST00000577396 RNF225M0QZC1 329 aaPredicted RBP21.28■■□□□ 1
SUPT4H1-202ENST00000577396 CLDN5O00501 218 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 LRG1P02750 347 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 TPM2P07951 284 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 BDNFP23560 247 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 ALDH1A3P47895 512 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 CYP27A1Q02318 531 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 CBX2Q14781 532 aaPredicted RBP21.28■■□□□ 1
SUPT4H1-202ENST00000577396 FUKQ8N0W3 1084 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 SEPT5Q99719 369 aaPredicted RBP21.28■■□□□ 1
SUPT4H1-202ENST00000577396 RTN4Q9NQC3 1192 aaKnown RBP21.28■■□□□ 1
SUPT4H1-202ENST00000577396 TMEM30AQ9NV96 361 aa21.28■■□□□ 1
SUPT4H1-202ENST00000577396 DNMT3BQ9UBC3 853 aaKnown RBP21.28■■□□□ 1
SUPT4H1-202ENST00000577396 XYLBO75191 536 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 IL9P15248 144 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 MTHFRP42898 656 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 YWHAEP62258 255 aaKnown RBP21.27■■□□□ 1
SUPT4H1-202ENST00000577396 KLHDC7AQ5VTJ3 777 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 VSTM1Q6UX27 236 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 ENOSF1Q7L5Y1 443 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 RIPOR3Q96MK2 946 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 ZNF518BQ9C0D4 1074 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 WDR6Q9NNW5 1121 aaKnown RBP21.27■■□□□ 1
SUPT4H1-202ENST00000577396 AJAP1Q9UKB5 411 aaPredicted RBP21.27■■□□□ 1
SUPT4H1-202ENST00000577396 SIK3Q9Y2K2 1263 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 C2orf16Q68DN1 1984 aa21.27■■□□□ 1
SUPT4H1-202ENST00000577396 GPR15P49685 360 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 CACNA2D1P54289 1103 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 MFAP3P55082 362 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 DDR2Q16832 855 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 FKBP15Q5T1M5 1219 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 GRASPQ7Z6J2 395 aaPredicted RBP21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 CYFIP2Q96F07 1278 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 FAM81BQ96LP2 452 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 HEXIM2Q96MH2 286 aaKnown RBP21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 NAP1L5Q96NT1 182 aaPredicted RBP21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 NECTIN4Q96NY8 510 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 ERGIC2Q96RQ1 377 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 HNRNPABQ99729 332 aaKnown RBP21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 POMKQ9H5K3 350 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 PIDD1Q9HB75 910 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 PLCB1Q9NQ66 1216 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 HCFC1R1Q9NWW0 138 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 NOTCH4Q99466 2003 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 GOLGA6L19H0YKK7 550 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 TEX33O43247 280 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 NOL4O94818 638 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 CCDC130P13994 396 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 KLK7P49862 253 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 ZNF132P52740 706 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 EPHB3P54753 998 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 UBXN1Q04323 297 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 PLD1Q13393 1074 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 TMEM270Q6UE05 265 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 DNAJB7Q7Z6W7 309 aaPredicted RBP21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 SLC2A14Q8TDB8 520 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 ZNF512Q96ME7 567 aaPredicted RBP21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 NAA15Q9BXJ9 866 aaKnown RBP21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 LRRC3Q9BY71 257 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 FAM49BQ9NUQ9 324 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 DNAJC12Q9UKB3 198 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 ASB3Q9Y575 518 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 PCDHB4Q9Y5E5 795 aa21.26■□□□□ 0.99
SUPT4H1-202ENST00000577396 PTPRDP23468 1912 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 A0A1B0GTH6 734 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 PTPN2P17706 415 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 NTHL1P78549 312 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 PPP1R26Q5T8A7 1209 aaPredicted RBP21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 SMYD5Q6GMV2 418 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 FAM35AQ86V20 835 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 GPR152Q8TDT2 470 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 SHC3Q92529 594 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 PSMG2Q969U7 264 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 FAM50BQ9Y247 325 aa21.25■□□□□ 0.99
SUPT4H1-202ENST00000577396 UCHL3P15374 230 aa21.24■□□□□ 0.99
SUPT4H1-202ENST00000577396 EPHA5P54756 1037 aa21.24■□□□□ 0.99
SUPT4H1-202ENST00000577396 RPL10AP62906 217 aaKnown RBP21.24■□□□□ 0.99
SUPT4H1-202ENST00000577396 TPM4P67936 248 aa21.24■□□□□ 0.99
SUPT4H1-202ENST00000577396 NR1I3Q14994 352 aa21.24■□□□□ 0.99
SUPT4H1-202ENST00000577396 SYCP1Q15431 976 aa21.24■□□□□ 0.99
SUPT4H1-202ENST00000577396 SDHAF4Q5VUM1 108 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms