RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 PRDM9Q9NQV7 894 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 FARSBQ9NSD9 589 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 TBC1D14Q9P2M4 693 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 MRPL11Q9Y3B7 192 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
TOM1L1-220ENST00000575333 PHLPP1O60346 1717 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 CLRN2A0PK11 232 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF839A8K0R7 811 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 TCEA3O75764 348 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 BMP15O95972 392 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 PAHP00439 452 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ITGB3P05106 788 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 USP17L8P0C7I0 530 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 FAM58BPP0C7Q3 252 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 PRKCAP17252 672 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 PGM1P36871 562 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 FDFT1P37268 417 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ALDH3B2P48448 385 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 CLK3P49761 638 aaKnown RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 PRKCQQ04759 706 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 RUNX1T1Q06455 604 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 NR1H3Q13133 447 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 OXA1LQ15070 435 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 STK11Q15831 433 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 GRIK5Q16478 980 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 TXNRD1Q16881 649 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 LMBRD2Q68DH5 695 aaPredicted RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 PCGF5Q86SE9 256 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 SNX32Q86XE0 403 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 TMPRSS6Q8IU80 811 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ELMOD2Q8IZ81 293 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 RASGEF1CQ8N431 466 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 FLAD1Q8NFF5 587 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 NEDD1Q8NHV4 660 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF420Q8TAQ5 688 aaPredicted RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ACTRT2Q8TDY3 377 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ZFPM2Q8WW38 1151 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF486Q96H40 463 aaPredicted RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 TTC25Q96NG3 672 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 SAMD11Q96NU1 681 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 OSBPL8Q9BZF1 889 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 OR2B2Q9GZK3 357 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 TRPV6Q9H1D0 765 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 SP140LQ9H930 580 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 IL21Q9HBE4 155 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF277Q9NRM2 450 aaPredicted RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 ZDHHC18Q9NUE0 388 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 SEPT11Q9NVA2 429 aaKnown RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 FBXO2Q9UK22 296 aaPredicted RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 PHTF1Q9UMS5 762 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 SRPRBQ9Y5M8 271 aaKnown RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 TACC3Q9Y6A5 838 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 DDX60Q8IY21 1712 aaKnown RBP8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 NFAT5O94916 1531 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 KIF1AQ12756 1690 aa8.32□□□□□ -1.08
TOM1L1-220ENST00000575333 DISP2A7MBM2 1401 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 RNF103O00237 685 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 KRIT1O00522 736 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 EDF1O60869 148 aaKnown RBP8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 PALMO75781 387 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 PLEKHA8P1O95397 391 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 CYP21A2P08686 494 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 INHBBP09529 407 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 C4AP0C0L4 1744 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 C4BP0C0L5 1744 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 RARBP10826 455 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 CCDC130P13994 396 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 CXCR2P25025 360 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 RCVRNP35243 200 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 PPP1R2P41236 205 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 STT3AP46977 705 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 IREB2P48200 963 aaKnown RBP8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 MAPKAPK2P49137 400 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 SLC5A3P53794 718 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 OCA2Q04671 838 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 GFPT1Q06210 699 aaPredicted RBP8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 RAD51Q06609 339 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 IRF5Q13568 498 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 LAPTM5Q13571 262 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 ATP1A4Q13733 1029 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 COL9A3Q14050 684 aaPredicted RBP8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 MAPK6Q16659 721 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 DGKDQ16760 1214 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 RILPL1Q5EBL4 403 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 EPHA10Q5JZY3 1008 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 SCARA3Q6AZY7 606 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 FCRLBQ6BAA4 426 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 FAM171BQ6P995 826 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 MPRIPQ6WCQ1 1025 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 TICAM1Q8IUC6 712 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 KIAA2013Q8IYS2 634 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF34Q8IZ26 560 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 ANKRD35Q8N283 1001 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 PDPRQ8NCN5 879 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 NGDNQ8NEJ9 315 aaKnown RBP8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 OR10Z1Q8NGY1 313 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 RAB3IL1Q8TBN0 382 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 HIPK3Q9H422 1215 aa8.31□□□□□ -1.08
TOM1L1-220ENST00000575333 ARMC7Q9H6L4 198 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms