RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 DHX37Q8IY37 1157 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SMC6Q96SB8 1091 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 PPP1R16BQ96T49 567 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SPATC1LQ9H0A9 340 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 MINDY3Q9H8M7 445 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 HMGXB4Q9UGU5 601 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 PCDHGC3Q9UN70 934 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SHOC2Q9UQ13 582 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ALOX15BO15296 676 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 TNNC2P02585 160 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CLCN3P51790 818 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 GPX6P59796 221 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 TAP1Q03518 808 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 GRM1Q13255 1194 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 TFDP1Q14186 410 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 MSS51Q4VC12 460 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ATF7IP2Q5U623 682 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 MPZL3Q6UWV2 235 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CEP128Q6ZU80 1094 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CCDC91Q7Z6B0 441 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 RIOX2Q8IUF8 465 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 NIPA2Q8N8Q9 360 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 GBP7Q8N8V2 638 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ANKLE1Q8NAG6 615 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 RXFP1Q9HBX9 757 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 METTL5Q9NRN9 209 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 NQO1P15559 274 aaKnown RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 PTPN7P35236 360 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 FNBP1LQ5T0N5 605 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 SYCP2LQ5T4T6 812 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 GADL1Q6ZQY3 521 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 GPR20Q99678 358 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 STRIP2Q9ULQ0 834 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 STK38LQ9Y2H1 464 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 CLUHO75153 1309 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 TCRBV7S3A2A0A539 114 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 CFAP73A6NFT4 308 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 SIGLEC16A6NMB1 481 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 PIK3R2O00459 728 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 ERBB2P04626 1255 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 NFICP08651 508 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 IQCF3P0C7M6 154 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 TGFB3P10600 412 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 POLR2BP30876 1174 aaKnown RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 YWHAEP62258 255 aaKnown RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 SLC1A5Q15758 541 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 PREPLQ4J6C6 727 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 SH3D19Q5HYK7 790 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 NOL9Q5SY16 702 aaKnown RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 POLNQ7Z5Q5 900 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 CPT1BQ92523 772 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 HSPH1Q92598 858 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 COPS5Q92905 334 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 FAM167AQ96KS9 214 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 CALN1Q9BXU9 219 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 MAK16Q9BXY0 300 aaKnown RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 SMYD3Q9H7B4 428 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 SIX4Q9UIU6 781 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 PHTF1Q9UMS5 762 aa11.79□□□□□ -0.52
RPAIN-212ENST00000573126 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-212ENST00000573126 A8MUI8 341 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 KRT16P08779 473 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 KRT4P19013 534 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 KDELR1P24390 212 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 RAD23BP54727 409 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 NR1H3Q13133 447 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 SPARCL1Q14515 664 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 CCDC142Q17RM4 750 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 ZNF667Q5HYK9 610 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 TSHZ1Q6ZSZ6 1077 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 TDRPQ86YL5 185 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 UNC45BQ8IWX7 931 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 FBXO16Q8IX29 292 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-212ENST00000573126 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 FAM71DQ8N9W8 422 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 DENND1AQ8TEH3 1009 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 PYROXD1Q8WU10 500 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 RSAD2Q8WXG1 361 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 SPATA33Q96N06 139 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 WDR83Q9BRX9 315 aaKnown RBP11.78□□□□□ -0.52
RPAIN-212ENST00000573126 SDCBP2Q9H190 292 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 CDT1Q9H211 546 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 PTPRHQ9HD43 1115 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 PSMC3IPQ9P2W1 217 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-212ENST00000573126 L3MBTL1Q9Y468 752 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 SIP14410 1827 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 GOLGA8RI6L899 631 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 ACKR2O00590 384 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 ITGB3P05106 788 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 KRT7P08729 469 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 FGFR1P11362 822 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 PROZP22891 400 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 RPL22P35268 128 aaKnown RBP11.78□□□□□ -0.52
RPAIN-212ENST00000573126 MAP2K2P36507 400 aa11.78□□□□□ -0.52
RPAIN-212ENST00000573126 IGBP1P78318 339 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms