RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ACSS3Q9H6R3 686 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 DCLRE1BQ9H816 532 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 JPH1Q9HDC5 661 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-205ENST00000571272 LNPEPQ9UIQ6 1025 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 CNTN6Q9UQ52 1028 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TCRBV5S1A1TA0A578 114 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TMEM63AO94886 807 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 CCND2P30279 289 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 ARFIP2P53365 341 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 RTP1P59025 263 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 ACTR2P61160 394 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 RASA2Q15283 850 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TEX9Q8N6V9 391 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 NAT8LQ8N9F0 302 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 DEPTORQ8TB45 409 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 FBXO41Q8TF61 875 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 MZB1Q8WU39 189 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TTC17Q96AE7 1141 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 CGRRF1Q99675 332 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TLE6Q9H808 572 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
SCARF1-205ENST00000571272 RNF146Q9NTX7 359 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 TJP2Q9UDY2 1190 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 CHMP2BQ9UQN3 213 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 KAT6AQ92794 2004 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 PPP1R12AO14974 1030 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-205ENST00000571272 CCDC22O60826 627 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 CD48P09326 243 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 WEE2P0C1S8 567 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 ATP4AP20648 1035 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 RFC1P35251 1148 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-205ENST00000571272 WDTC1Q8N5D0 677 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 DCAKDQ8WVC6 231 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 IMPG2Q9BZV3 1241 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 PPCSQ9HAB8 311 aa18.32■□□□□ 0.52
SCARF1-205ENST00000571272 DOCK5Q9H7D0 1870 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 GYG2O15488 501 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 LPXNO60711 386 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 PSMA2P25787 234 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 IL1R2P27930 398 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 BASP1P80723 227 aaKnown RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 PIGHQ14442 188 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 RCN1Q15293 331 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 SCARA5Q6ZMJ2 495 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 PCGF5Q86SE9 256 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 UNC45BQ8IWX7 931 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 TMEM35BQ8NCS4 154 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 ATG4CQ96DT6 458 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 FAM111AQ96PZ2 611 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 BTBD10Q9BSF8 475 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 MAP3K20Q9NYL2 800 aaKnown RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 SLC9A2Q9UBY0 812 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 XPO7Q9UIA9 1087 aaKnown RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 STYXL1Q9Y6J8 313 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 CNTNAP2Q9UHC6 1331 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 EME2A4GXA9 379 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 MT-ND3P03897 115 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 TNFSF9P41273 254 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 KPNB1Q14974 876 aaKnown RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 TSNAXIP1Q2TAA8 658 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 KLHL38Q2WGJ6 581 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 TTC7BQ86TV6 843 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 IGDCC3Q8IVU1 814 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 SCYL3Q8IZE3 742 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 FAM71DQ8N9W8 422 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 DTX3LQ8TDB6 740 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 ZNF483Q8TF39 744 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 TFAP2BQ92481 460 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 TMEM120AQ9BXJ8 343 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 SSU72Q9NP77 194 aaKnown RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 NMRK1Q9NWW6 199 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 DDX56Q9NY93 547 aaKnown RBP18.31■□□□□ 0.52
SCARF1-205ENST00000571272 WDR81Q562E7 1941 aa18.31■□□□□ 0.52
SCARF1-205ENST00000571272 C3orf70A6NLC5 250 aaPredicted RBP18.3■□□□□ 0.52
SCARF1-205ENST00000571272 H0YCG3 227 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 GSC2O15499 205 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 KRT36O76013 467 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 ZNF132P52740 706 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 MYL6P60660 151 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 MTMR2Q13614 643 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 ZNF398Q8TD17 642 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 LPAR1Q92633 364 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 GPRASP2Q96D09 838 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 GMLQ99445 158 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 SYT15Q9BQS2 421 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 VPS11Q9H270 941 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
SCARF1-205ENST00000571272 PCSK1NQ9UHG2 260 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 TRPC5Q9UL62 973 aaPredicted RBP18.3■□□□□ 0.52
SCARF1-205ENST00000571272 SPDYE5A6NIY4 337 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 TTLL13PA6NNM8 815 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 TM9SF1O15321 606 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 DKC1O60832 514 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCARF1-205ENST00000571272 BGNP21810 368 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 ACSBG2Q5FVE4 666 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 RFX8Q6ZV50 586 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 PDIK1LQ8N165 341 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 VPS52Q8N1B4 723 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms