RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SLC22A8Q8TCC7 542 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CCHCR1Q8TD31 782 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ACER1Q8TDN7 264 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CACTINQ8WUQ7 758 aaKnown RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 EZH1Q92800 747 aaPredicted RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 MS4A4AQ96JQ5 239 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CPVLQ9H3G5 476 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 RPRD1BQ9NQG5 326 aaKnown RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 MOSPD1Q9UJG1 213 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 KDM3AQ9Y4C1 1321 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 QSER1Q2KHR3 1735 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 NID2Q14112 1375 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 A0A1B0GVL5 298 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ADH1AP07327 375 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CCND1P24385 295 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 DPP6P42658 865 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ALDH5A1P51649 535 aaPredicted RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 YWHAEP62258 255 aaKnown RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 ORC2Q13416 577 aaPredicted RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 PDIA5Q14554 519 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 MTFR1Q15390 333 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 THOC7Q6I9Y2 204 aaKnown RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 SLC22A25Q6T423 547 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 GALNT7Q86SF2 657 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 OR6C4Q8NGE1 309 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 KCNN1Q92952 543 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CRELD1Q96HD1 420 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 CLIC6Q96NY7 704 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 TMEM47Q9BQJ4 181 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 ZNF576Q9H609 170 aa7.01□□□□□ -1.29
SMG1-217ENST00000569764 JPH1Q9HDC5 661 aaPredicted RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 LARSQ9P2J5 1176 aaKnown RBP7.01□□□□□ -1.29
SMG1-217ENST00000569764 COL4A5P29400 1685 aa7□□□□□ -1.29
SMG1-217ENST00000569764 CCDC169A6NNP5 214 aa7□□□□□ -1.29
SMG1-217ENST00000569764 TSPAN1O60635 241 aa7□□□□□ -1.29
SMG1-217ENST00000569764 PECAM1P16284 738 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 AXLP30530 894 aa7□□□□□ -1.29
SMG1-217ENST00000569764 HOXC12P31275 282 aa7□□□□□ -1.29
SMG1-217ENST00000569764 KRT2P35908 639 aa7□□□□□ -1.29
SMG1-217ENST00000569764 CCT5P48643 541 aa7□□□□□ -1.29
SMG1-217ENST00000569764 DIO1P49895 249 aa7□□□□□ -1.29
SMG1-217ENST00000569764 NDUFA8P51970 172 aa7□□□□□ -1.29
SMG1-217ENST00000569764 CCL23P55773 120 aa7□□□□□ -1.29
SMG1-217ENST00000569764 MXD4Q14582 209 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 XKR9Q5GH70 373 aa7□□□□□ -1.29
SMG1-217ENST00000569764 TMEM154Q6P9G4 183 aa7□□□□□ -1.29
SMG1-217ENST00000569764 LRRTM3Q86VH5 581 aa7□□□□□ -1.29
SMG1-217ENST00000569764 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 ST13P5Q8NFI4 369 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 TPCN2Q8NHX9 752 aa7□□□□□ -1.29
SMG1-217ENST00000569764 KRT35Q92764 455 aa7□□□□□ -1.29
SMG1-217ENST00000569764 BADQ92934 168 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ZNF566Q969W8 418 aa7□□□□□ -1.29
SMG1-217ENST00000569764 SPON2Q9BUD6 331 aa7□□□□□ -1.29
SMG1-217ENST00000569764 PLVAPQ9BX97 442 aa7□□□□□ -1.29
SMG1-217ENST00000569764 POLMQ9NP87 494 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 DDX4Q9NQI0 724 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 AIPL1Q9NZN9 384 aa7□□□□□ -1.29
SMG1-217ENST00000569764 EMC3Q9P0I2 261 aa7□□□□□ -1.29
SMG1-217ENST00000569764 PCDHA10Q9Y5I2 948 aa7□□□□□ -1.29
SMG1-217ENST00000569764 EYSQ5T1H1 3165 aa7□□□□□ -1.29
SMG1-217ENST00000569764 PDE4DIPQ5VU43 2346 aa7□□□□□ -1.29
SMG1-217ENST00000569764 NEMFO60524 1076 aa7□□□□□ -1.29
SMG1-217ENST00000569764 DDX5P17844 614 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 CDH3P22223 829 aa7□□□□□ -1.29
SMG1-217ENST00000569764 STAT1P42224 750 aa7□□□□□ -1.29
SMG1-217ENST00000569764 USP11P51784 963 aa7□□□□□ -1.29
SMG1-217ENST00000569764 CUL2Q13617 745 aa7□□□□□ -1.29
SMG1-217ENST00000569764 TUBA3CQ13748 450 aa7□□□□□ -1.29
SMG1-217ENST00000569764 LRRC23Q53EV4 343 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 CEP78Q5JTW2 689 aa7□□□□□ -1.29
SMG1-217ENST00000569764 RETSATQ6NUM9 610 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ZNF574Q6ZN55 896 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 RBM43Q6ZSC3 357 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 OSTM1Q86WC4 334 aa7□□□□□ -1.29
SMG1-217ENST00000569764 CLEC10AQ8IUN9 316 aa7□□□□□ -1.29
SMG1-217ENST00000569764 GRAMD2AQ8IUY3 354 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ZFPM1Q8IX07 1006 aa7□□□□□ -1.29
SMG1-217ENST00000569764 CCDC33Q8N5R6 958 aa7□□□□□ -1.29
SMG1-217ENST00000569764 FANCBQ8NB91 859 aa7□□□□□ -1.29
SMG1-217ENST00000569764 KIF18AQ8NI77 898 aa7□□□□□ -1.29
SMG1-217ENST00000569764 GJA10Q969M2 543 aa7□□□□□ -1.29
SMG1-217ENST00000569764 COL26A1Q96A83 441 aa7□□□□□ -1.29
SMG1-217ENST00000569764 MIEF2Q96C03 454 aa7□□□□□ -1.29
SMG1-217ENST00000569764 NRBF2Q96F24 287 aa7□□□□□ -1.29
SMG1-217ENST00000569764 SIKE1Q9BRV8 207 aa7□□□□□ -1.29
SMG1-217ENST00000569764 LUC7LQ9NQ29 371 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 ITM2CQ9NQX7 267 aa7□□□□□ -1.29
SMG1-217ENST00000569764 PKD2L1Q9P0L9 805 aa7□□□□□ -1.29
SMG1-217ENST00000569764 TUBE1Q9UJT0 475 aa7□□□□□ -1.29
SMG1-217ENST00000569764 SNED1Q8TER0 1413 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ENO4A6NNW6 628 aa7□□□□□ -1.29
SMG1-217ENST00000569764 C9IYK1 514 aa7□□□□□ -1.29
SMG1-217ENST00000569764 KLF4O43474 513 aa7□□□□□ -1.29
SMG1-217ENST00000569764 LRG1P02750 347 aa7□□□□□ -1.29
SMG1-217ENST00000569764 NFKBIAP25963 317 aa7□□□□□ -1.29
SMG1-217ENST00000569764 CST5P28325 142 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 IFNAR2P48551 515 aa7□□□□□ -1.29
SMG1-217ENST00000569764 PEX5P50542 639 aa7□□□□□ -1.29
SMG1-217ENST00000569764 EFNA5P52803 228 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms