RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 PRKD2Q9BZL6 878 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 CD207Q9UJ71 328 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 DNAJC12Q9UKB3 198 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 CNTN6Q9UQ52 1028 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 PCDHB5Q9Y5E4 795 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 FHOD1Q9Y613 1164 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 DOCK6Q96HP0 2047 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 FOXN3O00409 490 aaPredicted RBP17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 BEST1O76090 585 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 TWF1Q12792 350 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 NFE2Q16621 373 aaPredicted RBP17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 ARHGAP44Q17R89 818 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 LEXMQ3ZCV2 418 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 PPM1LQ5SGD2 360 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 LIN9Q5TKA1 542 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 GPR149Q86SP6 731 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 ANKRD20A12PQ8NF67 263 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 TFAP2BQ92481 460 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 SUSD6Q92537 303 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 ERGIC2Q96RQ1 377 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 KCNK16Q96T55 309 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 LSM14BQ9BX40 385 aaKnown RBP17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 GANQ9H2C0 597 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 SFXN1Q9H9B4 322 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 FAM207AQ9NSI2 230 aaPredicted RBP17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 DZANK1Q9NVP4 752 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 ZDHHC7Q9NXF8 308 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 DNMT3BQ9UBC3 853 aaKnown RBP17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 YIPF1Q9Y548 306 aa17.71■□□□□ 0.43
CNEP1R1-210ENST00000568890 GOLGA6L19H0YKK7 550 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 MBTPS2O43462 519 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 UCHL3P15374 230 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 NTHL1P78549 312 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 SMARCB1Q12824 385 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 PPP1R26Q5T8A7 1209 aaPredicted RBP17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 POTEHQ6S545 545 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 CCDC149Q6ZUS6 474 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 SPATA2LQ8IUW3 424 aaPredicted RBP17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 CMASQ8NFW8 434 aaPredicted RBP17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 SPPL2BQ8TCT7 592 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 SLC2A14Q8TDB8 520 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 TNIP3Q96KP6 325 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 HEXIM2Q96MH2 286 aaKnown RBP17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 SEPT5Q99719 369 aaPredicted RBP17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 MAFFQ9ULX9 164 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 PCDHB4Q9Y5E5 795 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 SERPINC1P01008 464 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 ZNF132P52740 706 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 FKBP15Q5T1M5 1219 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 C2orf15Q8WU43 125 aaKnown RBP17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 CYFIP2Q96F07 1278 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 PLCB1Q9NQ66 1216 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 HSFX1Q9UBD0 423 aa17.7■□□□□ 0.42
CNEP1R1-210ENST00000568890 HOXA9P31269 272 aa17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 MTMR3Q13615 1198 aa17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 GRASPQ7Z6J2 395 aaPredicted RBP17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 ZMIZ2Q8NF64 920 aa17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 GIPC2Q8TF65 315 aa17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 SHC3Q92529 594 aa17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 FUBP3Q96I24 572 aaKnown RBP eCLIP17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 ABCB6Q9NP58 842 aa17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 DPP7Q9UHL4 492 aa17.69■□□□□ 0.42
CNEP1R1-210ENST00000568890 MTCL1Q9Y4B5 1905 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 TRIOO75962 3097 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 SPDYE4A6NLX3 237 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 HNRNPA1P09651 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 SRGAP2BP0DMP2 458 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 IL9P15248 144 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 TUFMP49411 452 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 MFAP3P55082 362 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 ITIH3Q06033 890 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 MAPRE1Q15691 268 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 HS6ST3Q8IZP7 471 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 SMG7Q92540 1137 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 HNRNPABQ99729 332 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 LRRC3Q9BY71 257 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 FAM124BQ9H5Z6 455 aaPredicted RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 THEGQ9P2T0 379 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 F8VP50 259 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 TPM2P07951 284 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 ADORA2BP29275 332 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 CCR2P41597 374 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 UBASH3AP57075 661 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 DRAP1Q14919 205 aaPredicted RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 PTCRAQ6ISU1 281 aaPredicted RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 C4orf50Q6ZRC1 276 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 RTL10Q7L3V2 364 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 DNAJB7Q7Z6W7 309 aaPredicted RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 FAM35AQ86V20 835 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 RBBP8NLQ8NC74 664 aaPredicted RBP17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 SMOQ99835 787 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 POMKQ9H5K3 350 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 IFNKQ9P0W0 207 aa17.68■□□□□ 0.42
CNEP1R1-210ENST00000568890 CFHP08603 1231 aa17.67■□□□□ 0.42
CNEP1R1-210ENST00000568890 BMP1P13497 986 aa17.67■□□□□ 0.42
CNEP1R1-210ENST00000568890 HMGA1P17096 107 aaKnown RBP17.67■□□□□ 0.42
CNEP1R1-210ENST00000568890 SSTR3P32745 418 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms