RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	C20orf194	Q5TEA3	1177 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	OTUD7B	Q6GQQ9	843 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	LHFPL2	Q6ZUX7	228 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	SPATS2	Q86XZ4	545 aa	Known RBP	5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	TXLNB	Q8N3L3	684 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	CPEB3	Q8NE35	698 aa	Known RBP	5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	GPR150	Q8NGU9	434 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	AHCYL2	Q96HN2	611 aa	Known RBP	5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	WDR11	Q9BZH6	1224 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	SMC4	Q9NTJ3	1288 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	RAI14	Q9P0K7	980 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	PRKAB1	Q9Y478	270 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	FER1L6	Q2WGJ9	1857 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	ATP10D	Q9P241	1426 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	CEP350	Q5VT06	3117 aa		5.57	□□□□□ -1.52
CBFB-208	ENST00000567947	PIPSL	A2A3N6	862 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	KIF2A	O00139	706 aa	Predicted RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	ENDOD1	O94919	500 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	IGHD	P01880	384 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	GYS1	P13807	737 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	TYRP1	P17643	537 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	POU3F3	P20264	500 aa	Predicted RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	FBL	P22087	321 aa	Known RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	DDX6	P26196	483 aa	Known RBP eCLIP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	PRKAR2B	P31323	418 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	CYP2C19	P33261	490 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	CHN2	P52757	468 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	SLC5A3	P53794	718 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	SCAND1	P57086	179 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	SET	Q01105	290 aa	Predicted RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	SRSF2	Q01130	221 aa	Known RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	GUCY1B3	Q02153	619 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	TEF	Q10587	303 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	GPS2	Q13227	327 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	TAF7	Q15545	349 aa	Predicted RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	TOR2A	Q5JU69	321 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	ABHD17B	Q5VST6	288 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	ICE2	Q659A1	982 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	ZNF397	Q8NF99	534 aa	Predicted RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	PHACTR3	Q96KR7	559 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	CRAMP1	Q96RY5	1269 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	CYP4F11	Q9HBI6	524 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	LANCL2	Q9NS86	450 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	LMBRD1	Q9NUN5	540 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	KLHL11	Q9NVR0	708 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	MOCS1	Q9NZB8	636 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	ANKFY1	Q9P2R3	1169 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	CEP83	Q9Y592	693 aa		5.56	□□□□□ -1.52
CBFB-208	ENST00000567947	COL15A1	P39059	1388 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	LAMB2	P55268	1798 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	ERVV-1	B6SEH8	477 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	PPFIA2	O75334	1257 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	CCDC172	P0C7W6	258 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	EGR2	P11161	476 aa	Predicted RBP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	BMP5	P22003	454 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	AVPR1B	P47901	424 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	CCT2	P78371	535 aa	Known RBP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	SATB1	Q01826	763 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	BMP2KL	Q5H9B9	411 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	RNF219	Q5W0B1	726 aa	Predicted RBP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	AFMID	Q63HM1	303 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	SEM1	Q6ZVN7	128 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	PQLC1	Q8N2U9	271 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	IQUB	Q8NA54	791 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	OR56A1	Q8NGH5	318 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	KIF18A	Q8NI77	898 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	WDR66	Q8TBY9	1149 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	KIF1BP	Q96EK5	621 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	POLR3GL	Q9BT43	218 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	KRTAP9-8	Q9BYQ0	159 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	SYNPO2L	Q9H987	977 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	MED4	Q9NPJ6	270 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	DMRT3	Q9NQL9	472 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	PSD3	Q9NYI0	1048 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	DONSON	Q9NYP3	566 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	SIK3	Q9Y2K2	1263 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	USP15	Q9Y4E8	981 aa	Predicted RBP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	CARMIL3	Q8ND23	1372 aa		5.55	□□□□□ -1.52
CBFB-208	ENST00000567947	IL16	Q14005	1332 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	VGLL3	A8MV65	326 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	TEX33	O43247	280 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	CLSTN1	O94985	981 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	SPDEF	O95238	335 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	HMOX1	P09601	288 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	CAPN2	P17655	700 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	GCSH	P23434	173 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	CASQ1	P31415	396 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	RFC4	P35249	363 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	MCM2	P49736	904 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	GTF2A1	P52655	376 aa	Predicted RBP	5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	USP14	P54578	494 aa		5.54	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms