RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RBBP8NLQ8NC74 664 aaPredicted RBP12.22□□□□□ -0.45
KARS-207ENST00000566560 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 JAKMIP2Q96AA8 810 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 TNIP3Q96KP6 325 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 PGLYRP2Q96PD5 576 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 CDCA3Q99618 268 aaPredicted RBP12.22□□□□□ -0.45
KARS-207ENST00000566560 ELOVL4Q9GZR5 314 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 TLE6Q9H808 572 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 MTMR10Q9NXD2 777 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 MTMR11A4FU01 709 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 F8VZ95 297 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 AP5Z1O43299 807 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 ATP2C2O75185 946 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 NOL4O94818 638 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 PNMA6AP0CW24 399 aaPredicted RBP12.21□□□□□ -0.45
KARS-207ENST00000566560 PBX1P40424 430 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 USP8P40818 1118 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 CLCN4P51793 760 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 GPR17Q13304 367 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 MAPRE1Q15691 268 aaKnown RBP12.21□□□□□ -0.45
KARS-207ENST00000566560 NFE2Q16621 373 aaPredicted RBP12.21□□□□□ -0.45
KARS-207ENST00000566560 LLGL2Q6P1M3 1020 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 CACNA2D4Q7Z3S7 1137 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 ACOT1Q86TX2 421 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 PPFIBP1Q86W92 1011 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 PALB2Q86YC2 1186 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 SHC3Q92529 594 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 MYLPFQ96A32 169 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 SPAG5Q96R06 1193 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 PKMYT1Q99640 499 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 NAA15Q9BXJ9 866 aaKnown RBP12.21□□□□□ -0.45
KARS-207ENST00000566560 NLRC4Q9NPP4 1024 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 CRTAC1Q9NQ79 661 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 FAM49BQ9NUQ9 324 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 ABI2Q9NYB9 513 aaPredicted RBP12.21□□□□□ -0.45
KARS-207ENST00000566560 CEP72Q9P209 647 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 AFF4Q9UHB7 1163 aaKnown RBP12.21□□□□□ -0.45
KARS-207ENST00000566560 FBXW11Q9UKB1 542 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 HCFC2Q9Y5Z7 792 aa12.21□□□□□ -0.45
KARS-207ENST00000566560 PATJQ8NI35 1801 aa12.21□□□□□ -0.46
KARS-207ENST00000566560 ATP8B3O60423 1300 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 ITIH6Q6UXX5 1313 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 MYBPHLA2RUH7 354 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 TGM5O43548 720 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 SRGAP2BP0DMP2 458 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 CCDC130P13994 396 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 CD19P15391 556 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 PTPN1P18031 435 aaKnown RBP12.2□□□□□ -0.46
KARS-207ENST00000566560 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
KARS-207ENST00000566560 CDR1P51861 262 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 ZNF132P52740 706 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 RAD23BP54727 409 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 CYP27A1Q02318 531 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 ADCY1Q08828 1119 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 HYAL1Q12794 435 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 SMARCB1Q12824 385 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 DRAP1Q14919 205 aaPredicted RBP12.2□□□□□ -0.46
KARS-207ENST00000566560 LIN9Q5TKA1 542 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 TPGS2Q68CL5 300 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 LRRTM3Q86VH5 581 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
KARS-207ENST00000566560 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 ZNF461Q8TAF7 563 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 MYCBPAPQ8TBZ2 947 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 PCED1BQ96HM7 432 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 TMEM176AQ96HP8 235 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
KARS-207ENST00000566560 STK33Q9BYT3 514 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 GPR88Q9GZN0 384 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 IGFLR1Q9H665 355 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 TMLHEQ9NVH6 421 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 GTF3C4Q9UKN8 822 aa12.2□□□□□ -0.46
KARS-207ENST00000566560 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 PRRG1O14668 218 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 ABLIM3O94929 683 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 PAEPP09466 180 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 EPCAMP16422 314 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 ZNF75DP51815 510 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 JAM2P57087 298 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 SPECC1LQ69YQ0 1117 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 FAM171BQ6P995 826 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 ELMSAN1Q6PJG2 1045 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 FAM35AQ86V20 835 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 VSTM4Q8IW00 320 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 CRYBG2Q8N1P7 616 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 TTC9BQ8N6N2 239 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 EFHBQ8N7U6 833 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 ATAD1Q8NBU5 361 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 KREMEN2Q8NCW0 462 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 VN1R2Q8NFZ6 395 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 SPPL2BQ8TCT7 592 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 C2orf15Q8WU43 125 aaKnown RBP12.19□□□□□ -0.46
KARS-207ENST00000566560 SLC22A17Q8WUG5 538 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 IQCDQ96DY2 449 aa12.19□□□□□ -0.46
KARS-207ENST00000566560 HEXIM2Q96MH2 286 aaKnown RBP12.19□□□□□ -0.46
KARS-207ENST00000566560 SEPT5Q99719 369 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms