RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 DCP1BQ8IZD4 617 aaKnown RBP8.69□□□□□ -1.02
CDH13-208ENST00000566333 TTC39CQ8N584 583 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 KREMEN2Q8NCW0 462 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 MAFAQ8NHW3 353 aaPredicted RBP8.69□□□□□ -1.02
CDH13-208ENST00000566333 OLIG1Q8TAK6 271 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 SLC7A14Q8TBB6 771 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 TFAP2BQ92481 460 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 BAP1Q92560 729 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 ZNF707Q96C28 371 aaPredicted RBP8.69□□□□□ -1.02
CDH13-208ENST00000566333 MSLNLQ96KJ4 702 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 NT5C1AQ9BXI3 368 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 B3GNT5Q9BYG0 378 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 ZNF518BQ9C0D4 1074 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 IGFLR1Q9H665 355 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 ABCB6Q9NP58 842 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 ACP6Q9NPH0 428 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 ABI2Q9NYB9 513 aaPredicted RBP8.69□□□□□ -1.02
CDH13-208ENST00000566333 CDH22Q9UJ99 828 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 DNAJC12Q9UKB3 198 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 INSL5Q9Y5Q6 135 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 ITIH6Q6UXX5 1313 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 MUC3AQ02505 3323 aa8.69□□□□□ -1.02
CDH13-208ENST00000566333 TCF20Q9UGU0 1960 aaKnown RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 O00370 1275 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 CLDN5O00501 218 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 NRG2O14511 850 aaPredicted RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 ZMYND10O75800 440 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 GYPCP04921 128 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 POU2F2P09086 479 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 PAEPP09466 180 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 CYP2F1P24903 491 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 HOXA9P31269 272 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 MAGEA11P43364 429 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 GPR15P49685 360 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 MFAP3P55082 362 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 SMARCB1Q12824 385 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 DUSP4Q13115 394 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 RAPGEF1Q13905 1077 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 DRAP1Q14919 205 aaPredicted RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 MAPRE1Q15691 268 aaKnown RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 NFE2Q16621 373 aaPredicted RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 FIGNQ5HY92 759 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 PPP1R26Q5T8A7 1209 aaPredicted RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 ARHGAP17Q68EM7 881 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 ANKRD54Q6NXT1 300 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 FAM71AQ8IYT1 594 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 SMRP1Q8NCR6 262 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 STKLD1Q8NE28 680 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 ZMIZ2Q8NF64 920 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 NEK11Q8NG66 645 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 SPPL2BQ8TCT7 592 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 SLC2A14Q8TDB8 520 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 C2orf15Q8WU43 125 aaKnown RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 HDAC7Q8WUI4 952 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 CASP10Q92851 521 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 TMEM176AQ96HP8 235 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 FUBP3Q96I24 572 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDH13-208ENST00000566333 TNIP3Q96KP6 325 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 FAM81BQ96LP2 452 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 PLEKHA4Q9H4M7 779 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 UBE2ZQ9H832 354 aaPredicted RBP8.68□□□□□ -1.02
CDH13-208ENST00000566333 SFXN1Q9H9B4 322 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 NLRC4Q9NPP4 1024 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 KRT82Q9NSB4 513 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 DZANK1Q9NVP4 752 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 CLDND1Q9NY35 253 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 CEP72Q9P209 647 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 HSFX1Q9UBD0 423 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 MAFFQ9ULX9 164 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 DAAM1Q9Y4D1 1078 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 PCDHB5Q9Y5E4 795 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 PCDHB4Q9Y5E5 795 aa8.68□□□□□ -1.02
CDH13-208ENST00000566333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 FOXN3O00409 490 aaPredicted RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 CYP26A1O43174 497 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 BEST1O76090 585 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 HAPLN1P10915 354 aaPredicted RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 KRT5P13647 590 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 BDNFP23560 247 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 BRD2P25440 801 aaKnown RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 CLCN1P35523 988 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 CYP27A1Q02318 531 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 PKDCCQ504Y2 493 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 LIN9Q5TKA1 542 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 C4orf50Q6ZRC1 276 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 TTC30AQ86WT1 665 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 SPATA2LQ8IUW3 424 aaPredicted RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 GPIHBP1Q8IV16 184 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 VSTM4Q8IW00 320 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 C12orf76Q8N812 135 aaPredicted RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 CMASQ8NFW8 434 aaPredicted RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 PPM1EQ8WY54 764 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 SMARCD1Q96GM5 515 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 SEPT5Q99719 369 aaPredicted RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 HNRNPABQ99729 332 aaKnown RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 SMOQ99835 787 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 STK33Q9BYT3 514 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms