RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CSTF1Q05048 431 aaKnown RBP16.27■□□□□ 0.2
CMTM3-212ENST00000566121 MTAPQ13126 283 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 TAF12Q16514 161 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 KNOP1Q1ED39 458 aaKnown RBP16.27■□□□□ 0.2
CMTM3-212ENST00000566121 STXBP5Q5T5C0 1151 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 FAM200AQ8TCP9 573 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 KBTBD7Q8WVZ9 684 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 ATRIPQ8WXE1 791 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 LMAN1LQ9HAT1 526 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 ABI2Q9NYB9 513 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-212ENST00000566121 EHD2Q9NZN4 543 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 TCHHQ07283 1943 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 CMA1P23946 247 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 ME1P48163 572 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 PPP3CCP48454 512 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 MCCD1P59942 119 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-212ENST00000566121 AMPD2Q01433 879 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 CYP24A1Q07973 514 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 BFSP1Q12934 665 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 ERMP1Q7Z2K6 904 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 OSTM1Q86WC4 334 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 MRPS31Q92665 395 aaKnown RBP16.26■□□□□ 0.19
CMTM3-212ENST00000566121 CGRRF1Q99675 332 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 TDP1Q9NUW8 608 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 DMAC2Q9NW81 257 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 GTF3C4Q9UKN8 822 aa16.26■□□□□ 0.19
CMTM3-212ENST00000566121 DENND4CQ5VZ89 1909 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 PTPRJQ12913 1337 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 SPECC1L-ADORA2AF8WAN1 911 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 PRAMEF12O95522 483 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 HSP90AA1P07900 732 aaKnown RBP16.25■□□□□ 0.19
CMTM3-212ENST00000566121 KRT19P08727 400 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 CCNE1P24864 410 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 CYP2F1P24903 491 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 CTHP32929 405 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 CNR2P34972 360 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 AVPR1AP37288 418 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 ENPEPQ07075 957 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 CCINQ13939 588 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 ITPRIPL2Q3MIP1 535 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 MYCBPAPQ8TBZ2 947 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 GIPC2Q8TF65 315 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 HPS3Q969F9 1004 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 FNBP1Q96RU3 617 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-212ENST00000566121 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
CMTM3-212ENST00000566121 CCDC163A0A0D9SF12 145 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 TRDMT1O14717 391 aaKnown RBP16.24■□□□□ 0.19
CMTM3-212ENST00000566121 KLRC4O43908 158 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 CST3P01034 146 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-212ENST00000566121 CXCL12P48061 93 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 PDE6CP51160 858 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 KPNA1P52294 538 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-212ENST00000566121 PDGFRLQ15198 375 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 SCARA3Q6AZY7 606 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 SPATA2LQ8IUW3 424 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-212ENST00000566121 CEP57L1Q8IYX8 460 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 FSIP1Q8NA03 581 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 USP13Q92995 863 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-212ENST00000566121 EXOC4Q96A65 974 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 PI4K2AQ9BTU6 479 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 TTLL2Q9BWV7 592 aa16.24■□□□□ 0.19
CMTM3-212ENST00000566121 MAGEC2Q9UBF1 373 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-212ENST00000566121 KIF26AQ9ULI4 1882 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-212ENST00000566121 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 PDXKO00764 312 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 MAPK13O15264 365 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 ACTN4O43707 911 aaKnown RBP16.23■□□□□ 0.19
CMTM3-212ENST00000566121 GNL1P36915 607 aaPredicted RBP16.23■□□□□ 0.19
CMTM3-212ENST00000566121 NOP14P78316 857 aaKnown RBP16.23■□□□□ 0.19
CMTM3-212ENST00000566121 CYP4F8P98187 520 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 CUL4BQ13620 913 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 DDR2Q16832 855 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 PARD3BQ8TEW8 1205 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 C8orf48Q96LL4 319 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 XYLT2Q9H1B5 865 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 GCNT4Q9P109 453 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 NDRG2Q9UN36 371 aaKnown RBP16.23■□□□□ 0.19
CMTM3-212ENST00000566121 TICRRQ7Z2Z1 1910 aa16.23■□□□□ 0.19
CMTM3-212ENST00000566121 COL4A3Q01955 1670 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 IKBKBO14920 756 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 LRP3O75074 770 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 TADA3O75528 432 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 USP17L7P0C7H9 530 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 TNNI1P19237 187 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 LMO2P25791 158 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 DNM1Q05193 864 aaKnown RBP16.22■□□□□ 0.19
CMTM3-212ENST00000566121 RUNX3Q13761 415 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 GAS6Q14393 721 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 NFIL3Q16649 462 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 TMEM196Q5HYL7 178 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 TXNDC11Q6PKC3 985 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 MAB21L3Q8N8X9 362 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 ZNF516Q92618 1163 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 SYAP1Q96A49 352 aaPredicted RBP16.22■□□□□ 0.19
CMTM3-212ENST00000566121 PAGE5Q96GU1 130 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms