RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 BDNFP23560 247 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 FSHRP23945 695 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 SSTR3P32745 418 aaPredicted RBP17■□□□□ 0.31
RAB40C-208ENST00000564703 MAGEA11P43364 429 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 MFAP3P55082 362 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 PABPC1LQ4VXU2 614 aaKnown RBP17■□□□□ 0.31
RAB40C-208ENST00000564703 RRAGAQ7L523 313 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 OTOP3Q7RTS5 596 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 DNAJB7Q7Z6W7 309 aaPredicted RBP17■□□□□ 0.31
RAB40C-208ENST00000564703 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 TTC9BQ8N6N2 239 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 LEMD2Q8NC56 503 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 GIPC2Q8TF65 315 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 TMEM176AQ96HP8 235 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 ELOVL4Q9GZR5 314 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 CRISPLD1Q9H336 500 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17■□□□□ 0.319e-8■■■■■ 27
RAB40C-208ENST00000564703 DNMT3BQ9UBC3 853 aaKnown RBP17■□□□□ 0.31
RAB40C-208ENST00000564703 CDH22Q9UJ99 828 aa17■□□□□ 0.31
RAB40C-208ENST00000564703 COL6A3P12111 3177 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 GOLGA6L19H0YKK7 550 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 TRIM66O15016 1216 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 FGF19O95750 216 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 RHOP08100 348 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 CSH1P0DML2 217 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 CSH2P0DML3 217 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 SLC9A1P19634 815 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 GBP2P32456 591 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-208ENST00000564703 GCNT1Q02742 428 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 ORC1Q13415 861 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 NCAPHQ15003 741 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 KRT31Q15323 416 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 DDR2Q16832 855 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 MIIPQ5JXC2 388 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 TRIM65Q6PJ69 517 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 PDZD4Q76G19 769 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-208ENST00000564703 ENOSF1Q7L5Y1 443 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 ADAMTS19Q8TE59 1207 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 ARID3AQ99856 593 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 LPIN3Q9BQK8 851 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 B3GNT5Q9BYG0 378 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 ASAH2Q9NR71 780 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 CEP72Q9P209 647 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 LIMA1Q9UHB6 759 aaKnown RBP16.99■□□□□ 0.31
RAB40C-208ENST00000564703 USTQ9Y2C2 406 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 MRPS23Q9Y3D9 190 aaKnown RBP16.99■□□□□ 0.31
RAB40C-208ENST00000564703 NME7Q9Y5B8 376 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 PCDHB4Q9Y5E5 795 aa16.99■□□□□ 0.31
RAB40C-208ENST00000564703 CLUHO75153 1309 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 LRRC10BA6NIK2 292 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 MYL4P12829 197 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 PON1P27169 355 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 NTHL1P78549 312 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 FILIP1LQ4L180 1135 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
RAB40C-208ENST00000564703 WHAMMQ8TF30 809 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 PSMG2Q969U7 264 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 JAKMIP2Q96AA8 810 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 CEP295NLQ96MC4 621 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 FAM49BQ9NUQ9 324 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 EHD2Q9NZN4 543 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 KIAA1257Q9ULG3 409 aa16.98■□□□□ 0.31
RAB40C-208ENST00000564703 REV3LO60673 3130 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 CLDN5O00501 218 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 SP100P23497 879 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 COPB1P53618 953 aaKnown RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 CCDC142Q17RM4 750 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 TMEM270Q6UE05 265 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 ARHGEF19Q8IW93 802 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 GJD3Q8N144 294 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 C12orf29Q8N999 325 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 TDRD5Q8NAT2 981 aaKnown RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 FEZF2Q8TBJ5 459 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 GPR152Q8TDT2 470 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 SMARCD1Q96GM5 515 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 UHRF1Q96T88 793 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 HNRNPABQ99729 332 aaKnown RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 AVENQ9NQS1 362 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 APEX2Q9UBZ4 518 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 HMGXB4Q9UGU5 601 aa16.97■□□□□ 0.31
RAB40C-208ENST00000564703 MAGED2Q9UNF1 606 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 ZFP37Q9Y6Q3 630 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-208ENST00000564703 AP1G2O75843 785 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 KRT5P13647 590 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 CD19P15391 556 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 ZNF18P17022 549 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 ATF6P18850 670 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 ADORA2BP29275 332 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 RAD23BP54727 409 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 SLC8A3P57103 927 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 UBXN1Q04323 297 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 ZP2Q05996 745 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 IQCB1Q15051 598 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 ARHGAP44Q17R89 818 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 SDHAF4Q5VUM1 108 aa16.96■□□□□ 0.31
RAB40C-208ENST00000564703 GET4Q7L5D6 327 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms