RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TRMT2BQ96GJ1 504 aaKnown RBP25.62■■□□□ 1.69
NME3-206ENST00000564252 KIF9Q9HAQ2 790 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 HPS4Q9NQG7 708 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 TDP1Q9NUW8 608 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 HSPBP1Q9NZL4 362 aa25.62■■□□□ 1.69
NME3-206ENST00000564252 ZNF233A6NK53 670 aa25.61■■□□□ 1.69
NME3-206ENST00000564252 EIF3DO15371 548 aaKnown RBP eCLIP25.61■■□□□ 1.69
NME3-206ENST00000564252 RSPO4Q2I0M5 234 aaPredicted RBP25.61■■□□□ 1.69
NME3-206ENST00000564252 CFAP221Q4G0U5 840 aa25.61■■□□□ 1.69
NME3-206ENST00000564252 SYNPOQ8N3V7 929 aa25.61■■□□□ 1.69
NME3-206ENST00000564252 MYRFLQ96LU7 910 aa25.61■■□□□ 1.69
NME3-206ENST00000564252 ZNF396Q96N95 335 aaPredicted RBP25.61■■□□□ 1.69
NME3-206ENST00000564252 UXTQ9UBK9 157 aaPredicted RBP25.61■■□□□ 1.69
NME3-206ENST00000564252 CHURC1-FNTBB4DL54 471 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 PCSK1P29120 753 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 FNTBP49356 437 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 MYO1EQ12965 1108 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 ZNF268Q14587 947 aaPredicted RBP25.6■■□□□ 1.69
NME3-206ENST00000564252 SURF1Q15526 300 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 LPAL2Q16609 132 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 TRIM68Q6AZZ1 485 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 CNNM4Q6P4Q7 775 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 FAM171BQ6P995 826 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 SHC4Q6S5L8 630 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 EPM2AIP1Q7L775 607 aaPredicted RBP25.6■■□□□ 1.69
NME3-206ENST00000564252 DPH6Q7L8W6 267 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 SPATA2LQ8IUW3 424 aaPredicted RBP25.6■■□□□ 1.69
NME3-206ENST00000564252 KBTBD7Q8WVZ9 684 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 DHX58Q96C10 678 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 CHFRQ96EP1 664 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 FUBP3Q96I24 572 aaKnown RBP eCLIP25.6■■□□□ 1.69
NME3-206ENST00000564252 HPDLQ96IR7 371 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 PARD6AQ9NPB6 346 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 GMEB2Q9UKD1 530 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 RAB23Q9ULC3 237 aa25.6■■□□□ 1.69
NME3-206ENST00000564252 OTOL1A6NHN0 477 aaPredicted RBP25.59■■□□□ 1.69
NME3-206ENST00000564252 CUTAO60888 179 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 YEATS4O95619 227 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 TNNC2P02585 160 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 ASIC1P78348 528 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 AMPD3Q01432 767 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 RUNX3Q13761 415 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 DUOXA2Q1HG44 320 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 LAIR1Q6GTX8 287 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 ZNF507Q8TCN5 953 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 EBF3Q9H4W6 596 aa25.59■■□□□ 1.69
NME3-206ENST00000564252 MED19A0JLT2 244 aaPredicted RBP25.58■■□□□ 1.69
NME3-206ENST00000564252 HRO43593 1189 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 ATP2C2O75185 946 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 LMO2P25791 158 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 FAM26FQ5R3K3 315 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 LONP2Q86WA8 852 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 WDR49Q8IV35 697 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 IQUBQ8NA54 791 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 C7orf25Q9BPX7 421 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 KIAA1586Q9HCI6 787 aa25.58■■□□□ 1.69
NME3-206ENST00000564252 R3HCC1Q9Y3T6 440 aaKnown RBP25.58■■□□□ 1.69
NME3-206ENST00000564252 TGFB1I1O43294 461 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 ARSAP15289 507 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 HOXC13P31276 330 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 MAGEA11P43364 429 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 TMEM196Q5HYL7 178 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 PRR23BQ6ZRT6 265 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 SCN4BQ8IWT1 228 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 SYT15Q9BQS2 421 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 CRTAC1Q9NQ79 661 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 AGPAT3Q9NRZ7 376 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 CDH9Q9ULB4 789 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 USP18Q9UMW8 372 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 GREB1Q4ZG55 1949 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 ANAPC1Q9H1A4 1944 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 NCOR2Q9Y618 2525 aa25.57■■□□□ 1.68
NME3-206ENST00000564252 TRDMT1O14717 391 aaKnown RBP25.56■■□□□ 1.68
NME3-206ENST00000564252 HOXA6P31267 233 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 CNR2P34972 360 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 PSMC1P62191 440 aaKnown RBP25.56■■□□□ 1.68
NME3-206ENST00000564252 LMNB2Q03252 620 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 EHHADHQ08426 723 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 SRSF5Q13243 272 aaKnown RBP25.56■■□□□ 1.68
NME3-206ENST00000564252 SIM2Q14190 667 aaPredicted RBP25.56■■□□□ 1.68
NME3-206ENST00000564252 SNRNP35Q16560 246 aaKnown RBP25.56■■□□□ 1.68
NME3-206ENST00000564252 HEATR6Q6AI08 1181 aaKnown RBP25.56■■□□□ 1.68
NME3-206ENST00000564252 FSTL4Q6MZW2 842 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 PKN3Q6P5Z2 889 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 C4orf50Q6ZRC1 276 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 TRAPPC11Q7Z392 1133 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 MYLPFQ96A32 169 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 SLC22A12Q96S37 553 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 TRPC7Q9HCX4 862 aa25.56■■□□□ 1.68
NME3-206ENST00000564252 PRR5-ARHGAP8B1AHC4 643 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 RETP07949 1114 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 WARSP23381 471 aaKnown RBP25.55■■□□□ 1.68
NME3-206ENST00000564252 ARHGAP8P85298 464 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 FAM160A1Q05DH4 1040 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 SPEM2Q0P670 501 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 PDGFRLQ15198 375 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 ZNF77Q15935 545 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 FOXD4L5Q5VV16 416 aaPredicted RBP25.55■■□□□ 1.68
NME3-206ENST00000564252 CC2D1AQ6P1N0 951 aaPredicted RBP25.55■■□□□ 1.68
NME3-206ENST00000564252 RDH13Q8NBN7 331 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms